Difference between revisions of "RXN-14396"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14396 RXN-14396] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14396 RXN-14396] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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** LEFT-TO-RIGHT
* common name:
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** coumarin biosynthesis (via 2-coumarate)
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* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''2''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
* [[RXN-8036]]
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** 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[CPD-11444]][c] '''+''' 1 [[WATER]][c]
** 15 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_6007]]
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** 1 preuroporphyrinogen[c] '''=>''' 1 uroporphyrinogen-I[c] '''+''' 1 H2O[c]
*** [[Tiso_gene_6497]]
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*** [[Tiso_gene_507]]
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== Genes associated with this reaction  ==
*** [[Tiso_gene_6187]]
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== Pathways  ==
*** [[Tiso_gene_6188]]
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== Reconstruction information  ==
*** [[Tiso_gene_5836]]
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* Category: [[annotation]]
*** [[Tiso_gene_8669]]
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** Source: [[annotation-in-silico_annotation]]
*** [[Tiso_gene_15066]]
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*** Tool: [[pathwaytools]]
*** [[Tiso_gene_13306]]
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** Source: [[annotation-experimental_annotation]]
*** [[Tiso_gene_3467]]
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*** Tool: [[pathwaytools]]
*** [[Tiso_gene_10001]]
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*** [[Tiso_gene_15067]]
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*** [[Tiso_gene_2843]]
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*** [[Tiso_gene_2344]]
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*** [[Tiso_gene_13305]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-8037]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.114-RXN 2.4.1.114-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8035 RXN-8035]
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-2-MONOOXYGENASE-RXN TRANS-CINNAMATE-2-MONOOXYGENASE-RXN]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-3398}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=coumarin biosynthesis (via 2-coumarate)}}
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{{#set: in pathway=}}
{{#set: reaction found=2}}
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{{#set: reconstruction category=annotation}}
{{#set: total reaction=5}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
{{#set: completion rate=40.0}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:11, 21 March 2018

Reaction RXN-14396

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

Reconstruction information

External links