Difference between revisions of "PWY-7398"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSLIG-RXN P-PANTOCYSLIG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzym...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSLIG-RXN P-PANTOCYSLIG-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://enzyme.expasy.org/EC/6.3.2.5 EC-6.3.2.5]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** coumarins biosynthesis (engineered)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''13''' reactions in the full pathway
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** 1 [[4-P-PANTOTHENATE]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[R-4-PHOSPHOPANTOTHENOYL-L-CYSTEINE]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[PPI]][c]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 (R)-4'-phosphopantothenate[c] '''+''' 1 L-cysteine[c] '''+''' 1 CTP[c] '''=>''' 1 H+[c] '''+''' 1 R-4'-phosphopantothenoyl-L-cysteine[c] '''+''' 1 CMP[c] '''+''' 1 diphosphate[c]
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*** [[Tiso_gene_12275]]
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*** [[Tiso_gene_14183]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* [[Tiso_gene_15171]]
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*** [[orthology-esiliculosus]]
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** [[pantograph]]-[[synechocystis]]
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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== Pathways  ==
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** 2 associated gene(s):
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* [[COA-PWY]], coenzyme A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
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*** [[Tiso_gene_10561]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[Tiso_gene_14561]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* [[RXN-1126]]
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** 2 associated gene(s):
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*** [[Tiso_gene_14183]]
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*** [[Tiso_gene_12275]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12349 RXN-12349]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12350 RXN-12350]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12963 RXN-12963]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12965 RXN-12965]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14987 RXN-14987]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14988 RXN-14988]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14990 RXN-14990]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16762 RXN-16762]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16763 RXN-16763]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9697 RXN-9697]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25157 25157]
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{{#set: taxonomic range=TAX-33090}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04231 R04231]
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{{#set: common name=coumarins biosynthesis (engineered)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=3}}
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{{#set: ec number=EC-6.3.2.5}}
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{{#set: total reaction=13}}
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{{#set: gene associated=Tiso_gene_15171}}
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{{#set: completion rate=23.0}}
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{{#set: in pathway=COA-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:11, 21 March 2018

Pathway PWY-7398

Reaction(s) found

3 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7398&oldid=40041"