Difference between revisions of "RXN-9543"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9543 RXN-9543] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9543 RXN-9543] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** pyridoxal 5'-phosphate salvage II (plants)
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** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199]
 
* Synonym(s):
 
* Synonym(s):
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** vitamin B6 salvage (plants)
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''8''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[3.1.3.74-RXN]]
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** 1 [[PALMITYL-COA]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-10260]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_18054]]
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** 1 palmitoyl-CoA[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 3-oxo-stearoyl-CoA[c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-creinhardtii]]
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== Genes associated with this reaction  ==
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* [[PMPOXI-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* Gene: [[Tiso_gene_6671]]
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*** [[Tiso_gene_1471]]
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** Source: [[orthology-creinhardtii]]
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972]
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*** [[orthology-esiliculosus]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PNKIN-RXN]]
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== Reconstruction information  ==
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** 1 associated gene(s):
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* Category: [[orthology]]
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*** [[Tiso_gene_6106]]
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** Source: [[orthology-creinhardtii]]
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** 4 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[PNPOXI-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1471]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PYRAMKIN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_6106]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[PYRIDOXINE-4-DEHYDROGENASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18748]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[PYRIDOXKIN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_6106]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-14181]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18054]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14046 RXN-14046]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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* LIGAND-RXN:
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{{#set: common name=pyridoxal 5'-phosphate salvage II (plants)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07758 R07758]
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{{#set: common name=vitamin B6 salvage (plants)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=8}}
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{{#set: ec number=EC-2.3.1.199}}
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{{#set: total reaction=9}}
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{{#set: gene associated=Tiso_gene_6671}}
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{{#set: completion rate=89.0}}
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{{#set: in pathway=PWY-5972}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:11, 21 March 2018

Reaction RXN-9543

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5972, stearate biosynthesis I (animals and fungi): PWY-5972
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9543&oldid=40046"