Difference between revisions of "PWY-6368"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2.1...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6368 PWY-6368] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6368 PWY-6368] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/1.2.1.8 EC-1.2.1.8]
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** 3-phosphoinositide degradation
 
* Synonym(s):
 
* Synonym(s):
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** phosphatidyl-inositol 3,4,5-trisphosphate degradation
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''9''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 1 [[BETAINE]][c] '''+''' 1 [[NADH]][c]
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* [[3.1.3.66-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 betaine aldehyde[c] '''<=>''' 2 H+[c] '''+''' 1 glycine betaine[c] '''+''' 1 NADH[c]
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*** [[Tiso_gene_3052]]
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*** [[Tiso_gene_4822]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_4823]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_3513]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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* [[3.1.3.67-RXN]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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*** [[Tiso_gene_19083]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[PWY1F-353]], glycine betaine biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
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*** [[orthology-athaliana]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[PWY-7494]], choline degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494]
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== Reaction(s) not found ==
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN]
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10036 RXN-10036]
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* [[PWY-3722]], glycine betaine biosynthesis II (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3722 PWY-3722]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10947 RXN-10947]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10961 RXN-10961]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10962 RXN-10962]
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* [[orthology]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9779 RXN-9779]
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** [[pantograph]]:
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30070 30070]
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{{#set: common name=3-phosphoinositide degradation}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15305 15305]
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{{#set: common name=phosphatidyl-inositol 3,4,5-trisphosphate degradation}}
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* LIGAND-RXN:
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{{#set: reaction found=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02565 R02565]
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{{#set: total reaction=9}}
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* UNIPROT:
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{{#set: completion rate=22.0}}
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** [http://www.uniprot.org/uniprot/P17202 P17202]
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** [http://www.uniprot.org/uniprot/P17445 P17445]
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** [http://www.uniprot.org/uniprot/P28237 P28237]
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** [http://www.uniprot.org/uniprot/P42757 P42757]
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** [http://www.uniprot.org/uniprot/Q40024 Q40024]
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** [http://www.uniprot.org/uniprot/O24174 O24174]
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** [http://www.uniprot.org/uniprot/Q43828 Q43828]
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** [http://www.uniprot.org/uniprot/Q43829 Q43829]
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** [http://www.uniprot.org/uniprot/O22477 O22477]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.2.1.8}}
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{{#set: gene associated=Tiso_gene_3513}}
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{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|PWY1F-353|PWY-7494|BETSYN-PWY|PWY-3722}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:24, 21 March 2018

Pathway PWY-6368

  • taxonomic range:
  • common name:
    • 3-phosphoinositide degradation
  • Synonym(s):
    • phosphatidyl-inositol 3,4,5-trisphosphate degradation

Reaction(s) found

2 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6368&oldid=41372"