Difference between revisions of "Tiso gene 18793"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1099 CPD-1099] == * smiles: ** C(OC1(C(C(C(C(CO)O1)O)O)O))C2(C(C(C(C(O2)OC3(CO)(C(C(C(CO)O3...")
(Created page with "Category:Gene == Gene Tiso_gene_18793 == * right end position: ** 2084 * transcription direction: ** POSITIVE * left end position: ** 1018 * centisome position: ** 36.4352...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1099 CPD-1099] ==
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== Gene Tiso_gene_18793 ==
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* smiles:
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* right end position:
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** C(OC1(C(C(C(C(CO)O1)O)O)O))C2(C(C(C(C(O2)OC3(CO)(C(C(C(CO)O3)O)O))O)O)O)
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** 2084
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* inchi key:
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* transcription direction:
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** InChIKey=MUPFEKGTMRGPLJ-ZQSKZDJDSA-N
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** POSITIVE
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* common name:
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* left end position:
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** raffinose
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** 1018
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* molecular weight:
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* centisome position:
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** 504.441    
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** 36.43522    
 
* Synonym(s):
 
* Synonym(s):
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** melitose
 
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** melitriose
 
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** gossypose
 
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** 6G-α-D-galactosylsucrose
 
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** (2S,3R,4S,5S,6R)-2-[[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
 
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** α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf
 
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** α-D-galactopyranosyl-(1->6)-α-D-glucopyranosyl-(1->2)-β-D-fructofuranoside
 
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** D-raffinose
 
  
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== Reaction(s) known to consume the compound ==
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== Reactions associated ==
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* [[RFH]]
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* Reaction: [[DCTP-PYROPHOSPHATASE-RXN]]
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* [[RXN-11502]]
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) known to produce the compound ==
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*** Assignment: ec-number
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* [[RXN-11501]]
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* Reaction: [[DGTD]]
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== Reaction(s) of unknown directionality ==
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** Source: [[orthology-creinhardtii]]
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* [[2.4.1.67-RXN]]
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* Reaction: [[DUTNH]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[DUTP-PYROP-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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* Reaction: [[ITPP]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[NTDP]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[NTPD]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14139]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN-14140]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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* Reaction: [[RXN0-1602]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-1603]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-383]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-384]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-385]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-5107]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-6382]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[UTPPH]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[PWY-7206]]
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* [[PWY-7184]]
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* [[PWY-7187]]
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* [[PWY-7821]]
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* [[PWY0-166]]
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* [[PWY-6545]]
 
== External links  ==
 
== External links  ==
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* CAS : 512-69-6
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{{#set: right end position=2084}}
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* PUBCHEM:
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{{#set: transcription direction=POSITIVE}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=439242 439242]
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{{#set: left end position=1018}}
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* KEGG-GLYCAN : G00249
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{{#set: centisome position=36.43522   }}
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* HMDB : HMDB03213
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{{#set: reaction associated=DCTP-PYROPHOSPHATASE-RXN|DGTD|DUTNH|DUTP-PYROP-RXN|ITPP|NTDP|NTPD|NUCLEOTIDE-PYROPHOSPHATASE-RXN|RXN-14139|RXN-14140|RXN0-1602|RXN0-1603|RXN0-383|RXN0-384|RXN0-385|RXN0-5107|RXN0-6382|UTPPH}}
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* LIGAND-CPD:
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{{#set: pathway associated=PWY-7206|PWY-7184|PWY-7187|PWY-7821|PWY0-166|PWY-6545}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00492 C00492]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.388379.html 388379]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16634 16634]
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* METABOLIGHTS : MTBLC16634
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{{#set: smiles=C(OC1(C(C(C(C(CO)O1)O)O)O))C2(C(C(C(C(O2)OC3(CO)(C(C(C(CO)O3)O)O))O)O)O)}}
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−
{{#set: inchi key=InChIKey=MUPFEKGTMRGPLJ-ZQSKZDJDSA-N}}
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{{#set: common name=raffinose}}
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{{#set: molecular weight=504.441   }}
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−
{{#set: common name=melitose|melitriose|gossypose|6G-α-D-galactosylsucrose|(2S,3R,4S,5S,6R)-2-[[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol|α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf|α-D-galactopyranosyl-(1->6)-α-D-glucopyranosyl-(1->2)-β-D-fructofuranoside|D-raffinose}}
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{{#set: consumed by=RFH|RXN-11502}}
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{{#set: produced by=RXN-11501}}
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{{#set: reversible reaction associated=2.4.1.67-RXN}}
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Latest revision as of 19:13, 21 March 2018

Gene Tiso_gene_18793

  • right end position:
    • 2084
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1018
  • centisome position:
    • 36.43522
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18793&oldid=40209"