Difference between revisions of "PRPP"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PRPP PRPP] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(OP([O-])(=O)OP([O-])(=O)[O-])C(O)C(O)1) * c...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Metabolite]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PRPP PRPP] ==
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* taxonomic range:
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* smiles:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** C(OP(=O)([O-])[O-])C1(OC(OP([O-])(=O)OP([O-])(=O)[O-])C(O)C(O)1)
 
* common name:
 
* common name:
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** TCA cycle VII (acetate-producers)
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** 5-phospho-α-D-ribose 1-diphosphate
 +
* inchi key:
 +
** InChIKey=PQGCEDQWHSBAJP-TXICZTDVSA-I
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* molecular weight:
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** 385.031   
 
* Synonym(s):
 
* Synonym(s):
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** tricarboxylic acid cycle
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** PRPP
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** citric acid cycle
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** 5-phosphoribosyl 1-pyrophosphate
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** Krebs cycle
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** 5-phosphoribosyl diphosphate
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** Szent-Gyorgyi-Krebs cycle
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** 5-phosphoribosyl-1-PP
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** 5-phosphoribosyl-PP
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** 5-phosphoribosyl-1-pyrophosphate
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** 5-phosphoribosylpyrophosphate
 +
** phosphoribosylpyrophosphate
 +
** 5-phospho-ribosyl-pyrophosphate
 +
** α-D-5-phosphoribosylPP
 +
** α-D-5-P-RibosylPP
  
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== Reaction(s) found ==
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== Reaction(s) known to consume the compound ==
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'''5''' reactions found over '''9''' reactions in the full pathway
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* [[2.4.2.12-RXN]]
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* [[ACONITATEDEHYDR-RXN]]
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* [[HYPOXANPRIBOSYLTRAN-RXN]]
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** 1 associated gene(s):
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* [[XANPRIBOSYLTRAN-RXN]]
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*** [[Tiso_gene_13007]]
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* [[URACIL-PRIBOSYLTRANS-RXN]]
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** 3 reconstruction source(s) associated:
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* [[QUINOPRIBOTRANS-RXN]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) known to produce the compound ==
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*** [[annotation-in-silico_annotation]]
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* [[R5PDP]]
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*** [[orthology-synechocystis]]
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* [[RXN0-1401]]
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* [[ACONITATEHYDR-RXN]]
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== Reaction(s) of unknown directionality ==
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** 1 associated gene(s):
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* [[OROPRIBTRANS-RXN]]
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*** [[Tiso_gene_13007]]
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* [[GUANPRIBOSYLTRAN-RXN]]
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** 2 reconstruction source(s) associated:
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* [[PRPPSYN-RXN]]
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*** [[annotation-in-silico_annotation]]
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* [[orPRT]]
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*** [[annotation-experimental_annotation]]
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* [[RPDPK]]
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* [[CITSYN-RXN]]
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* [[ATPPHOSPHORIBOSYLTRANS-RXN]]
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** 4 associated gene(s):
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* [[PRTRANS-RXN]]
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*** [[Tiso_gene_18030]]
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* [[PRPPAMIDOTRANS-RXN]]
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*** [[Tiso_gene_9601]]
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−
*** [[Tiso_gene_9603]]
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−
*** [[Tiso_gene_9602]]
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** 3 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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−
*** [[Tiso_gene_6720]]
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−
*** [[Tiso_gene_3691]]
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−
** 6 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ISOCITDEH-RXN]]
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** 2 associated gene(s):
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−
*** [[Tiso_gene_18262]]
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−
*** [[Tiso_gene_10809]]
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−
** 4 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
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−
== Reaction(s) not found ==
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−
* [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8807 RXN-8807]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* CAS : 13270-65-0
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{{#set: common name=TCA cycle VII (acetate-producers)}}
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* BIGG : prpp
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{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}}
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* PUBCHEM:
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{{#set: reaction found=5}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20848918 20848918]
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{{#set: total reaction=9}}
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* HMDB : HMDB00280
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{{#set: completion rate=56.0}}
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* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?C00119 C00119]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.20171339.html 20171339]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58017 58017]
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* METABOLIGHTS : MTBLC58017
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(OP([O-])(=O)OP([O-])(=O)[O-])C(O)C(O)1)}}
 +
{{#set: common name=5-phospho-α-D-ribose 1-diphosphate}}
 +
{{#set: inchi key=InChIKey=PQGCEDQWHSBAJP-TXICZTDVSA-I}}
 +
{{#set: molecular weight=385.031    }}
 +
{{#set: common name=PRPP|5-phosphoribosyl 1-pyrophosphate|5-phosphoribosyl diphosphate|5-phosphoribosyl-1-PP|5-phosphoribosyl-PP|5-phosphoribosyl-1-pyrophosphate|5-phosphoribosylpyrophosphate|phosphoribosylpyrophosphate|5-phospho-ribosyl-pyrophosphate|α-D-5-phosphoribosylPP|α-D-5-P-RibosylPP}}
 +
{{#set: consumed by=2.4.2.12-RXN|HYPOXANPRIBOSYLTRAN-RXN|XANPRIBOSYLTRAN-RXN|URACIL-PRIBOSYLTRANS-RXN|QUINOPRIBOTRANS-RXN}}
 +
{{#set: produced by=R5PDP|RXN0-1401}}
 +
{{#set: reversible reaction associated=OROPRIBTRANS-RXN|GUANPRIBOSYLTRAN-RXN|PRPPSYN-RXN|orPRT|RPDPK|ATPPHOSPHORIBOSYLTRANS-RXN|PRTRANS-RXN|PRPPAMIDOTRANS-RXN}}

Latest revision as of 19:13, 21 March 2018

Metabolite PRPP

  • smiles:
    • C(OP(=O)([O-])[O-])C1(OC(OP([O-])(=O)OP([O-])(=O)[O-])C(O)C(O)1)
  • common name:
    • 5-phospho-α-D-ribose 1-diphosphate
  • inchi key:
    • InChIKey=PQGCEDQWHSBAJP-TXICZTDVSA-I
  • molecular weight:
    • 385.031
  • Synonym(s):
    • PRPP
    • 5-phosphoribosyl 1-pyrophosphate
    • 5-phosphoribosyl diphosphate
    • 5-phosphoribosyl-1-PP
    • 5-phosphoribosyl-PP
    • 5-phosphoribosyl-1-pyrophosphate
    • 5-phosphoribosylpyrophosphate
    • phosphoribosylpyrophosphate
    • 5-phospho-ribosyl-pyrophosphate
    • α-D-5-phosphoribosylPP
    • α-D-5-P-RibosylPP

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 13270-65-0
  • BIGG : prpp
  • PUBCHEM:
  • HMDB : HMDB00280
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC58017
"C(OP(=O)([O-])[O-])C1(OC(OP([O-])(=O)OP([O-])(=O)[O-])C(O)C(O)1)" cannot be used as a page name in this wiki.




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