Difference between revisions of "Tiso gene 7682"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Gene == Gene Tiso_gene_7682 == * right end position: ** 10904 * transcription direction: ** POSITIVE * left end position: ** 9294 * centisome position: ** 85.1722...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] ==
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== Gene Tiso_gene_7682 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** 10904
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* common name:
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* transcription direction:
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** mevalonate pathway II (archaea)
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** POSITIVE
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* left end position:
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** 9294
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* centisome position:
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** 85.17229   
 
* Synonym(s):
 
* Synonym(s):
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** isoprenoid pathway
 
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** MVA pathway
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''5''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[RIBOKIN-RXN]]
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* [[1.1.1.34-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_17889]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_16182]]
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*** Assignment: ec-number
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* Reaction: [[RXN-14223]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 3 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_16181]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_15327]]
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*** Assignment: ec-number
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*** [[Tiso_gene_17451]]
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** Source: [[orthology-esiliculosus]]
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** 4 reconstruction source(s) associated:
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== Pathways associated ==
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*** [[orthology-athaliana]]
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* [[RIBOKIN-PWY]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14303]]
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*** [[Tiso_gene_9236]]
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*** [[Tiso_gene_8563]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[IPPISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_8653]]
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** 2 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[MEVALONATE-KINASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_3811]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10067 RXN-10067]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10068 RXN-10068]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2157}}
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{{#set: right end position=10904}}
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{{#set: common name=mevalonate pathway II (archaea)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=isoprenoid pathway|MVA pathway}}
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{{#set: left end position=9294}}
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{{#set: reaction found=5}}
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{{#set: centisome position=85.17229    }}
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{{#set: total reaction=7}}
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{{#set: reaction associated=RIBOKIN-RXN|RXN-14223}}
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{{#set: completion rate=71.0}}
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{{#set: pathway associated=RIBOKIN-PWY}}

Latest revision as of 19:13, 21 March 2018

Gene Tiso_gene_7682

  • right end position:
    • 10904
  • transcription direction:
    • POSITIVE
  • left end position:
    • 9294
  • centisome position:
    • 85.17229
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7682&oldid=40257"