Difference between revisions of "Tiso gene 3406"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11477 RXN-11477] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier...")
(Created page with "Category:Gene == Gene Tiso_gene_3406 == * right end position: ** 6659 * transcription direction: ** NEGATIVE * left end position: ** 4 * centisome position: ** 2.390485700...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11477 RXN-11477] ==
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== Gene Tiso_gene_3406 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6659
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* common name:
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* transcription direction:
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** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 4
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* centisome position:
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** 2.390485700e-2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[3-Hydroxyglutaryl-ACP-methyl-ester]][c] '''=>''' 1 [[Enoylglutaryl-ACP-methyl-esters]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a (3R)-3-hydroxyglutaryl-[acp] methyl ester[c] '''=>''' 1 an enoylglutaryl-[acp] methyl ester[c] '''+''' 1 H2O[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6884]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6885]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6659}}
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{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: left end position=4}}
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{{#set: gene associated=Tiso_gene_6884|Tiso_gene_6885}}
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{{#set: centisome position=2.390485700e-2}}
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{{#set: in pathway=PWY-6519}}
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{{#set: reaction associated=ATPASE-RXN}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:13, 21 March 2018

Gene Tiso_gene_3406

  • right end position:
    • 6659
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4
  • centisome position:
    • 2.390485700e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3406&oldid=40282"