Difference between revisions of "GUANYL-KIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6-PHOSPHOFRUCTO-2-KINASE-RXN 6-PHOSPHOFRUCTO-2-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phospho...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6-PHOSPHOFRUCTO-2-KINASE-RXN 6-PHOSPHOFRUCTO-2-KINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
 +
** thymidine_phosphorylase
 
** ORF
 
** ORF
−
** fructose-_-bisphosphatase
 
−
** fructose-_-bisphophatase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.105 EC-2.7.1.105]
+
** [http://enzyme.expasy.org/EC/2.7.4.8 EC-2.7.4.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-535]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[GMP]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 β-D-fructofuranose 6-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 β-D-fructose 2,6-bisphosphate[c] '''+''' 1 ADP[c]
+
** 1 ATP[c] '''+''' 1 GMP[c] '''=>''' 1 GDP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2100]]
+
* Gene: [[Tiso_gene_1011]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_15049]]
−
* [[Tiso_gene_893]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[athaliana]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_892]]
+
** Source: [[orthology-athaliana]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-synechocystis]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_12554]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_15398]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-synechocystis]]
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_4560]]
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_804]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-423]], fructose 2,6-bisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-423 PWY66-423]
+
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15653 15653]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02732 R02732]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P26285 P26285]
+
** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8]
−
** [http://www.uniprot.org/uniprot/P25114 P25114]
+
** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3]
−
** [http://www.uniprot.org/uniprot/Q7M3I3 Q7M3I3]
+
** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96]
−
** [http://www.uniprot.org/uniprot/P49872 P49872]
+
** [http://www.uniprot.org/uniprot/P44310 P44310]
−
** [http://www.uniprot.org/uniprot/Q28830 Q28830]
+
** [http://www.uniprot.org/uniprot/P15454 P15454]
−
** [http://www.uniprot.org/uniprot/Q91348 Q91348]
+
** [http://www.uniprot.org/uniprot/P60546 P60546]
−
** [http://www.uniprot.org/uniprot/Q9JJH5 Q9JJH5]
+
** [http://www.uniprot.org/uniprot/P31006 P31006]
−
** [http://www.uniprot.org/uniprot/Q16875 Q16875]
+
** [http://www.uniprot.org/uniprot/P46195 P46195]
−
** [http://www.uniprot.org/uniprot/P07953 P07953]
+
** [http://www.uniprot.org/uniprot/Q16774 Q16774]
−
** [http://www.uniprot.org/uniprot/P16118 P16118]
+
** [http://www.uniprot.org/uniprot/P72648 P72648]
−
** [http://www.uniprot.org/uniprot/P40433 P40433]
+
** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9]
−
** [http://www.uniprot.org/uniprot/Q12471 Q12471]
+
** [http://www.uniprot.org/uniprot/Q9M681 Q9M681]
−
** [http://www.uniprot.org/uniprot/P70265 P70265]
+
−
** [http://www.uniprot.org/uniprot/P70266 P70266]
+
−
** [http://www.uniprot.org/uniprot/O24559 O24559]
+
−
** [http://www.uniprot.org/uniprot/O81398 O81398]
+
−
** [http://www.uniprot.org/uniprot/O64983 O64983]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=thymidine_phosphorylase}}
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=fructose-_-bisphosphatase}}
+
{{#set: ec number=EC-2.7.4.8}}
−
{{#set: common name=fructose-_-bisphophatase}}
+
{{#set: gene associated=Tiso_gene_1011|Tiso_gene_15049|Tiso_gene_12554|Tiso_gene_4560}}
−
{{#set: ec number=EC-2.7.1.105}}
+
{{#set: in pathway=PWY-7221}}
−
{{#set: gene associated=Tiso_gene_2100|Tiso_gene_893|Tiso_gene_892|Tiso_gene_15398|Tiso_gene_804}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: in pathway=PWY66-423}}
+
{{#set: reconstruction source=manual-primary_network|orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation}}
+
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:14, 21 March 2018

Reaction GUANYL-KIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thymidine_phosphorylase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 GMP[c] => 1 GDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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