Difference between revisions of "NAD-BIOSYNTHESIS-II"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOLACT-RXN GLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** gluconolactonas...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOLACT-RXN GLUCONOLACT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** gluconolactonase
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** NAD salvage pathway III
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.17 EC-3.1.1.17]
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* Synonym(s):
 
* Synonym(s):
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** nicotinamide adenine dinucleotide salvage
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''5''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[GLC-D-LACTONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLUCONATE]][c]
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* [[RXN-5822]]
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* With common name(s):
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** 8 associated gene(s):
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** 1 H2O[c] '''+''' 1 D-glucono-1,5-lactone[c] '''=>''' 1 H+[c] '''+''' 1 D-gluconate[c]
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*** [[Tiso_gene_9372]]
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*** [[Tiso_gene_17309]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_15256]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_3271]]
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* [[Tiso_gene_1947]]
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*** [[Tiso_gene_8159]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_10738]]
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***EC-NUMBER
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*** [[Tiso_gene_5996]]
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* [[Tiso_gene_15098]]
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*** [[Tiso_gene_17310]]
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_1948]]
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* [[RXN-5841]]
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** IN-SILICO_ANNOTATION
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** 7 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_5911]]
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== Pathways  ==
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*** [[Tiso_gene_6988]]
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* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
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*** [[Tiso_gene_13929]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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*** [[Tiso_gene_14434]]
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* [[PWY-7165]], L-ascorbate biosynthesis VI (engineered pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7165 PWY-7165]
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*** [[Tiso_gene_14246]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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*** [[Tiso_gene_6640]]
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* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY]
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*** [[Tiso_gene_14435]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
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*** [[annotation-in-silico_annotation]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[PWY-5530]], sorbitol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5530 PWY-5530]
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== Reaction(s) not found ==
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN]
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* [[DHGLUCONATE-PYR-CAT-PWY]], glucose degradation (oxidative): [http://metacyc.org/META/NEW-IMAGE?object=DHGLUCONATE-PYR-CAT-PWY DHGLUCONATE-PYR-CAT-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4106 PWY3O-4106]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4106 PWY3O-4106]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10440 10440]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01519 R01519]
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{{#set: common name=NAD salvage pathway III}}
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* UNIPROT:
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{{#set: common name=nicotinamide adenine dinucleotide salvage}}
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** [http://www.uniprot.org/uniprot/Q01578 Q01578]
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{{#set: reaction found=2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=5}}
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{{#set: common name=gluconolactonase}}
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{{#set: completion rate=40.0}}
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{{#set: ec number=EC-3.1.1.17}}
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{{#set: gene associated=Tiso_gene_1947|Tiso_gene_15098|Tiso_gene_1948}}
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{{#set: in pathway=PWY-2221|PWY-7165|NPGLUCAT-PWY|GLUCOSE1PMETAB-PWY|PWY-5530|DHGLUCONATE-PYR-CAT-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:14, 21 March 2018

Pathway NAD-BIOSYNTHESIS-II

  • taxonomic range:
  • common name:
    • NAD salvage pathway III
  • Synonym(s):
    • nicotinamide adenine dinucleotide salvage

Reaction(s) found

2 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NAD-BIOSYNTHESIS-II&oldid=40327"