Difference between revisions of "PWY-6797"

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(Created page with "Category:Gene == Gene Tiso_gene_5857 == * left end position: ** 56 * transcription direction: ** NEGATIVE * right end position: ** 2702 * centisome position: ** 0.43583158...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_5857 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797] ==
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* left end position:
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* taxonomic range:
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** 56
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* transcription direction:
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* common name:
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** NEGATIVE
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** 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
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* right end position:
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** 2702
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* centisome position:
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** 0.43583158   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
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'''3''' reactions found over '''7''' reactions in the full pathway
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** [[pantograph]]-[[athaliana]]
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* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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** 38 associated gene(s):
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* [[HACD5]]
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*** [[Tiso_gene_10760]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_2019]]
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* [[HACD5m]]
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*** [[Tiso_gene_5713]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_1142]]
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* [[HBCHL]]
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*** [[Tiso_gene_17467]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_15988]]
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* [[HBCHLm]]
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*** [[Tiso_gene_10288]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_8599]]
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* [[HBCO]]
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*** [[Tiso_gene_2924]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_10158]]
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* [[HMNOS]]
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*** [[Tiso_gene_4112]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_15582]]
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* [[METHYLACYLYLCOA-HYDROXY-RXN]]
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*** [[Tiso_gene_277]]
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_16712]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_17804]]
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* [[OHACYL-COA-DEHYDROG-RXN]]
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*** [[Tiso_gene_7067]]
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** in-silico_annotation
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*** [[Tiso_gene_19075]]
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***ec-number
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*** [[Tiso_gene_4645]]
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** experimental_annotation
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*** [[Tiso_gene_12514]]
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***ec-number
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*** [[Tiso_gene_3667]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_6144]]
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* [[PEROXID-RXN]]
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*** [[Tiso_gene_3314]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_6277]]
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* [[RXN-10698]]
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*** [[Tiso_gene_8600]]
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** in-silico_annotation
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*** [[Tiso_gene_13604]]
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***ec-number
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*** [[Tiso_gene_12636]]
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** experimental_annotation
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*** [[Tiso_gene_2747]]
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***ec-number
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*** [[Tiso_gene_18343]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_13784]]
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* [[RXN-10702]]
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*** [[Tiso_gene_14428]]
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** in-silico_annotation
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*** [[Tiso_gene_8601]]
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***ec-number
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*** [[Tiso_gene_11387]]
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** experimental_annotation
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*** [[Tiso_gene_6767]]
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***ec-number
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*** [[Tiso_gene_1799]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_16176]]
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* [[RXN-10703]]
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*** [[Tiso_gene_43]]
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** in-silico_annotation
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*** [[Tiso_gene_13847]]
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***ec-number
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*** [[Tiso_gene_13729]]
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** experimental_annotation
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** 3 reconstruction source(s) associated:
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***ec-number
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*** [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-synechocystis]]
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* [[RXN-11245]]
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*** [[orthology-esiliculosus]]
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** in-silico_annotation
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* [[H2NEOPTERINALDOL-RXN]]
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***ec-number
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** 2 associated gene(s):
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** experimental_annotation
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*** [[Tiso_gene_2576]]
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***ec-number
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*** [[Tiso_gene_2577]]
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** [[pantograph]]-[[esiliculosus]]
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** 1 reconstruction source(s) associated:
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* [[RXN-11662]]
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*** [[annotation-in-silico_annotation]]
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** in-silico_annotation
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* [[H2PTERIDINEPYROPHOSPHOKIN-RXN]]
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***ec-number
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** 1 associated gene(s):
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** experimental_annotation
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*** [[Tiso_gene_11659]]
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***ec-number
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** 3 reconstruction source(s) associated:
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** [[pantograph]]-[[athaliana]]
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*** [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[orthology-esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Reaction(s) not found ==
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* [[RXN-11667]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10063 RXN-10063]
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** [[pantograph]]-[[athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12356 RXN-12356]
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* [[RXN-12490]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12357 RXN-12357]
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** in-silico_annotation
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12358 RXN-12358]
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***ec-number
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** experimental_annotation
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−
***ec-number
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** [[pantograph]]-[[athaliana]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
* [[RXN-12507]]
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−
** [[pantograph]]-[[athaliana]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
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* [[RXN-12570]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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** [[pantograph]]-[[athaliana]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
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* [[RXN-12705]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-12750]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-14240]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-14266]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-14271]]
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−
** [[pantograph]]-[[athaliana]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
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* [[RXN-14275]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-15288]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-16133]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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−
***ec-number
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* [[RXN-17777]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-17781]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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* [[RXN-17786]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-17790]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-17793]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-17794]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-17797]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-17798]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-2425]]
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−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-6383]]
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−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[RXN-8635]]
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−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-905]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN0-2044]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[TIGLYLCOA-HYDROXY-RXN]]
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−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
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−
== Pathways associated ==
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−
* [[PWY-6920]]
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−
* [[P162-PWY]]
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−
* [[PWY-5177]]
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−
* [[PWY-6583]]
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−
* [[VALDEG-PWY]]
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−
* [[PWY-6883]]
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−
* [[PWY-7656]]
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−
* [[PWY-5136]]
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−
* [[PWY-7778]]
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−
* [[PWY-7779]]
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−
* [[PWY-7574]]
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−
* [[PWY-7094]]
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−
* [[PWY-7654]]
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−
* [[P3-PWY]]
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−
* [[PWY66-391]]
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−
* [[PWY-5789]]
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−
* [[PWY-5461]]
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−
* [[FAO-PWY]]
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−
* [[CENTFERM-PWY]]
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−
* [[PWY-6945]]
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−
* [[PWY0-321]]
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−
* [[PWY-5743]]
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−
* [[ILEUDEG-PWY]]
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−
* [[PWY-5744]]
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−
* [[PWY-7007]]
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−
* [[PWY-6435]]
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−
* [[PWY-7214]]
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−
* [[PWY-7216]]
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−
* [[PWY-1361]]
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−
* [[PWY-5109]]
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−
* [[PWY-7445]]
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−
* [[PWY-6946]]
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−
* [[PWY-81]]
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−
* [[PWY-6944]]
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−
* [[PWY-735]]
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−
* [[PWY-7401]]
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−
* [[PWY-6863]]
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−
* [[PWY-3941]]
+
 
== External links  ==
 
== External links  ==
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{{#set: left end position=56}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)}}
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{{#set: right end position=2702}}
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{{#set: reaction found=3}}
−
{{#set: centisome position=0.43583158    }}
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{{#set: total reaction=7}}
−
{{#set: reaction associated=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN|HACD5|HACD5m|HBCHL|HBCHLm|HBCO|HMNOS|METHYLACYLYLCOA-HYDROXY-RXN|OHACYL-COA-DEHYDROG-RXN|PEROXID-RXN|RXN-10698|RXN-10702|RXN-10703|RXN-11245|RXN-11662|RXN-11667|RXN-12490|RXN-12507|RXN-12570|RXN-12705|RXN-12750|RXN-14240|RXN-14266|RXN-14271|RXN-14275|RXN-15288|RXN-16133|RXN-17777|RXN-17781|RXN-17786|RXN-17790|RXN-17793|RXN-17794|RXN-17797|RXN-17798|RXN-2425|RXN-6383|RXN-8635|RXN-905|RXN0-2044|TIGLYLCOA-HYDROXY-RXN}}
+
{{#set: completion rate=43.0}}
−
{{#set: pathway associated=PWY-6920|P162-PWY|PWY-5177|PWY-6583|VALDEG-PWY|PWY-6883|PWY-7656|PWY-5136|PWY-7778|PWY-7779|PWY-7574|PWY-7094|PWY-7654|P3-PWY|PWY66-391|PWY-5789|PWY-5461|FAO-PWY|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-5743|ILEUDEG-PWY|PWY-5744|PWY-7007|PWY-6435|PWY-7214|PWY-7216|PWY-1361|PWY-5109|PWY-7445|PWY-6946|PWY-81|PWY-6944|PWY-735|PWY-7401|PWY-6863|PWY-3941}}
+

Latest revision as of 19:14, 21 March 2018

Pathway PWY-6797

  • taxonomic range:
  • common name:
    • 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
  • Synonym(s):

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6797&oldid=40359"