Difference between revisions of "Tiso gene 4175"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lactamase * ec number:...")
(Created page with "Category:Gene == Gene Tiso_gene_4175 == * right end position: ** 3654 * transcription direction: ** POSITIVE * left end position: ** 3128 * centisome position: ** 16.23754...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] ==
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== Gene Tiso_gene_4175 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3654
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* common name:
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* transcription direction:
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** beta-lactamase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
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** 3128
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* centisome position:
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** 16.237541   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TYROSINE--TRNA-LIGASE-RXN]]
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** 3 [[WATER]][c] '''+''' 2 [[CPD-12259]][c] '''=>''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12230]][c] '''+''' 4 [[D-ALANINE]][c]
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* With common name(s):
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** 3 H2O[c] '''+''' 2 a peptidoglycan dimer (S. aureus)[c] '''=>''' 1 di-trans,octa-cis-undecaprenyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 a peptidoglycan with D,D cross-link (S. aureus)[c] '''+''' 4 D-alanine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18870]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5265]], peptidoglycan biosynthesis II (staphylococci): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5265 PWY-5265]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3654}}
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{{#set: common name=beta-lactamase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-3.4.16.4}}
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{{#set: left end position=3128}}
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{{#set: gene associated=Tiso_gene_18870}}
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{{#set: centisome position=16.237541    }}
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{{#set: in pathway=PWY-5265}}
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{{#set: reaction associated=TYROSINE--TRNA-LIGASE-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:15, 21 March 2018

Gene Tiso_gene_4175

  • right end position:
    • 3654
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3128
  • centisome position:
    • 16.237541
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4175&oldid=40413"