Difference between revisions of "RXN-11065"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_8780 == * left end position: ** 8098 * transcription direction: ** POSITIVE * right end position: ** 9900 * centisome position: ** 81.79798...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lactamase * ec number:...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11065 RXN-11065] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** beta-lactamase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 3 [[WATER]][c] '''+''' 2 [[CPD-12259]][c] '''=>''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12230]][c] '''+''' 4 [[D-ALANINE]][c] |
| − | *** | + | * With common name(s): |
| − | == Pathways | + | ** 3 H2O[c] '''+''' 2 a peptidoglycan dimer (S. aureus)[c] '''=>''' 1 di-trans,octa-cis-undecaprenyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 a peptidoglycan with D,D cross-link (S. aureus)[c] '''+''' 4 D-alanine[c] |
| − | * [[ | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_18870]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-5265]], peptidoglycan biosynthesis II (staphylococci): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5265 PWY-5265] | ||
| + | ** '''3''' reactions found over '''10''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=beta-lactamase}} |
| − | {{#set: | + | {{#set: ec number=EC-3.4.16.4}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_18870}} |
| − | {{#set: | + | {{#set: in pathway=PWY-5265}} |
| − | {{#set: | + | {{#set: reconstruction category=annotation}} |
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:15, 21 March 2018
Contents
Reaction RXN-11065
- direction:
- LEFT-TO-RIGHT
- common name:
- beta-lactamase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 3 H2O[c] + 2 a peptidoglycan dimer (S. aureus)[c] => 1 di-trans,octa-cis-undecaprenyl diphosphate[c] + 1 H+[c] + 1 a peptidoglycan with D,D cross-link (S. aureus)[c] + 4 D-alanine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_18870
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-5265, peptidoglycan biosynthesis II (staphylococci): PWY-5265
- 3 reactions found over 10 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
