Difference between revisions of "TRANS-23-DEHYDROADIPYL-COA"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TRANS-23-DEHYDROADIPYL-COA TRANS-23-DEHYDROADIPYL-COA] == * smiles: ** CC(C)(C(O)C(=O)NCCC(=O)N...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TRANS-23-DEHYDROADIPYL-COA TRANS-23-DEHYDROADIPYL-COA] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C=CCCC(=O)[O-])=O)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
−
** 3-hydroxyacyl-_dehydrogenase
+
** trans-2,3-dehydroadipyl-coA
−
** hydroxyacyl-coenzyme_a_mitochondrial
+
* inchi key:
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
+
** InChIKey=ZFXICKRXPZTFPB-KCQRSJHASA-I
−
* ec number:
+
* molecular weight:
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
** 888.606   
 
* Synonym(s):
 
* Synonym(s):
 +
** cis-2,3-didehydroadipyl-CoA
 +
** 2,3-didehydroadipyl-CoA
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[L-3-HYDROXYACYL-COA]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-KETOACYL-COA]][c]
+
== Reaction(s) of unknown directionality ==
−
* With common name(s):
+
* [[RXN-2425]]
−
** 1 a (3S)-3-hydroxyacyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxoacyl-CoA[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14027]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18838]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18839]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14026]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5857]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22432 22432]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=70679154 70679154]
−
* PIR:
+
* HMDB : HMDB60392
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592]
+
* CHEBI:
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=71044 71044]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A55045 A55045]
+
* LIGAND-CPD:
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEPGC DEPGC]
+
** [http://www.genome.jp/dbget-bin/www_bget?C14144 C14144]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP]
+
{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C=CCCC(=O)[O-])=O)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4210 JC4210]
+
{{#set: common name=trans-2,3-dehydroadipyl-coA}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4879 JC4879]
+
{{#set: inchi key=InChIKey=ZFXICKRXPZTFPB-KCQRSJHASA-I}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199]
+
{{#set: molecular weight=888.606    }}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607]
+
{{#set: common name=cis-2,3-didehydroadipyl-CoA|2,3-didehydroadipyl-CoA}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678]
+
{{#set: reversible reaction associated=RXN-2425}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40743 S40743]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74114 S74114]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46866 T46866]
+
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P21177 P21177]
+
−
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
+
−
** [http://www.uniprot.org/uniprot/Q53924 Q53924]
+
−
** [http://www.uniprot.org/uniprot/P07896 P07896]
+
−
** [http://www.uniprot.org/uniprot/Q61425 Q61425]
+
−
** [http://www.uniprot.org/uniprot/Q16836 Q16836]
+
−
** [http://www.uniprot.org/uniprot/P28793 P28793]
+
−
** [http://www.uniprot.org/uniprot/P22414 P22414]
+
−
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
+
−
** [http://www.uniprot.org/uniprot/P34439 P34439]
+
−
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
+
−
** [http://www.uniprot.org/uniprot/P55100 P55100]
+
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
+
−
** [http://www.uniprot.org/uniprot/P00348 P00348]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
−
{{#set: ec number=EC-1.1.1.35}}
+
−
{{#set: gene associated=Tiso_gene_14262|Tiso_gene_14027|Tiso_gene_18838|Tiso_gene_18839|Tiso_gene_14026|Tiso_gene_5857}}
+
−
{{#set: in pathway=PWY-5136|PWY-7007|FAO-PWY|PWY66-391}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:16, 21 March 2018

Metabolite TRANS-23-DEHYDROADIPYL-COA

  • smiles:
    • CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C=CCCC(=O)[O-])=O)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • trans-2,3-dehydroadipyl-coA
  • inchi key:
    • InChIKey=ZFXICKRXPZTFPB-KCQRSJHASA-I
  • molecular weight:
    • 888.606
  • Synonym(s):
    • cis-2,3-didehydroadipyl-CoA
    • 2,3-didehydroadipyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C=CCCC(=O)[O-])=O)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRANS-23-DEHYDROADIPYL-COA&oldid=40525"