Difference between revisions of "PWY-5135"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] == * direction: ** REVER...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3481 TAX-34...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3481 TAX-3481]
 
* common name:
 
* common name:
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** ketopantoate_hydroxymethyltransferase
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** xanthohumol biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''4''' reactions in the full pathway
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** 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[2-DEHYDROPANTOATE]][c]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c] '''<=>''' 1 a tetrahydrofolate[c] '''+''' 1 2-dehydropantoate[c]
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*** [[Tiso_gene_12275]]
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*** [[Tiso_gene_14183]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* [[Tiso_gene_14465]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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== Reaction(s) not found ==
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=NARINGENIN-CHALCONE-SYNTHASE-RXN NARINGENIN-CHALCONE-SYNTHASE-RXN]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7820 RXN-7820]
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* [[Tiso_gene_14466]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7821 RXN-7821]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-3481}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11824 11824]
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{{#set: common name=xanthohumol biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
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{{#set: total reaction=4}}
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* UNIPROT:
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{{#set: completion rate=25.0}}
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** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
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** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
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** [http://www.uniprot.org/uniprot/P31057 P31057]
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** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
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** [http://www.uniprot.org/uniprot/P38122 P38122]
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** [http://www.uniprot.org/uniprot/Q09672 Q09672]
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** [http://www.uniprot.org/uniprot/P52997 P52997]
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** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
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** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
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** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
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** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
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** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ketopantoate_hydroxymethyltransferase}}
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{{#set: ec number=EC-2.1.2.11}}
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{{#set: gene associated=Tiso_gene_14465|Tiso_gene_14466}}
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{{#set: in pathway=PANTO-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:16, 21 March 2018

Pathway PWY-5135

  • taxonomic range:
  • common name:
    • xanthohumol biosynthesis
  • Synonym(s):

Reaction(s) found

1 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5135&oldid=40552"