Difference between revisions of "RXN-14216"

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(Created page with "Category:Gene == Gene Tiso_gene_5008 == * left end position: ** 4987 * transcription direction: ** POSITIVE * right end position: ** 8090 * centisome position: ** 35.51994...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14216 RXN-14216] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * Synonym(s): == React...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_5008 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14216 RXN-14216] ==
* left end position:
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* direction:
** 4987
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** ORF
* right end position:
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** 8090
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* centisome position:
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** 35.519943   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[1TRANSKETO-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[DCTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DCDP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 dCTP[c] '''+''' 1 H2O[c] '''=>''' 1 dCDP[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[synechocystis]]
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* Gene: [[Tiso_gene_12899]]
* [[2TRANSKETO-RXN]]
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** Source: [[annotation-in-silico_annotation]]
** in-silico_annotation
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*** Assignment: EC-NUMBER
***ec-number
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** Source: [[annotation-experimental_annotation]]
** experimental_annotation
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*** Assignment: EC-NUMBER
***ec-number
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* Gene: [[Tiso_gene_20236]]
** [[pantograph]]-[[athaliana]]
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** Source: [[orthology-esiliculosus]]
** [[pantograph]]-[[athaliana]]
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== Pathways ==
** [[pantograph]]-[[creinhardtii]]
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== Reconstruction information  ==
* [[R01067]]
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* Category: [[orthology]]
** [[pantograph]]-[[synechocystis]]
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** Source: [[orthology-esiliculosus]]
== Pathways associated ==
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*** Tool: [[pantograph]]
* [[PWY-6901]]
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* Category: [[annotation]]
* [[P124-PWY]]
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** Source: [[annotation-in-silico_annotation]]
* [[CALVIN-PWY]]
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*** Tool: [[pathwaytools]]
* [[P21-PWY]]
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** Source: [[annotation-experimental_annotation]]
* [[PWY-5723]]
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*** Tool: [[pathwaytools]]
* [[PWY-1861]]
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* [[P185-PWY]]
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* [[NONOXIPENT-PWY]]
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== External links  ==
 
== External links  ==
{{#set: left end position=4987}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
{{#set: right end position=8090}}
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{{#set: gene associated=Tiso_gene_12899|Tiso_gene_20236}}
{{#set: centisome position=35.519943    }}
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{{#set: in pathway=}}
{{#set: reaction associated=1TRANSKETO-RXN|2TRANSKETO-RXN|R01067}}
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{{#set: reconstruction category=orthology|annotation}}
{{#set: pathway associated=PWY-6901|P124-PWY|CALVIN-PWY|P21-PWY|PWY-5723|PWY-1861|P185-PWY|NONOXIPENT-PWY}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:16, 21 March 2018

Reaction RXN-14216

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dCTP[c] + 1 H2O[c] => 1 dCDP[c] + 1 phosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links