Difference between revisions of "RXN-12339"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5122 PWY-5122] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12339 RXN-12339] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5122 PWY-5122] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12339 RXN-12339] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://enzyme.expasy.org/EC/3.5.1.109 EC-3.5.1.109]
* common name:
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** geranyl diphosphate biosynthesis
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* Synonym(s):
 
* Synonym(s):
** GPP biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''1''' reactions found over '''1''' reactions in the full pathway
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* With identifiers:
* [[GPPSYN-RXN]]
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** 1 [[N-acyl-sphingosylphosphorylcholine]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-481]][c] '''+''' 1 [[Fatty-Acids]][c]
** 9 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_19542]]
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** 1 an N-acyl-sphingosylphosphorylcholine[c] '''+''' 1 H2O[c] '''=>''' 1 sphingosylphosphorylcholine[c] '''+''' 1 a fatty acid[c]
*** [[Tiso_gene_18201]]
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*** [[Tiso_gene_16284]]
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== Genes associated with this reaction  ==
*** [[Tiso_gene_2848]]
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== Pathways  ==
*** [[Tiso_gene_1035]]
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* [[PWY-7277]], sphingolipid biosynthesis (mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7277 PWY-7277]
*** [[Tiso_gene_4719]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
*** [[Tiso_gene_11582]]
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* [[PWY3DJ-11281]], sphingomyelin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11281 PWY3DJ-11281]
*** [[Tiso_gene_13582]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
*** [[Tiso_gene_10317]]
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== Reconstruction information  ==
** 5 reconstruction source(s) associated:
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* Category: [[annotation]]
*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
*** [[orthology-creinhardtii]]
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*** Tool: [[pathwaytools]]
*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
* ARACYC:
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* RHEA:
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5122 PWY-5122]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30914 30914]
{{#set: taxonomic range=TAX-2157}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-3.5.1.109}}
{{#set: taxonomic range=TAX-2759}}
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{{#set: in pathway=PWY-7277|PWY3DJ-11281}}
{{#set: common name=geranyl diphosphate biosynthesis}}
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{{#set: reconstruction category=annotation}}
{{#set: common name=GPP biosynthesis}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
{{#set: reaction found=1}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: total reaction=1}}
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{{#set: completion rate=100.0}}
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Latest revision as of 19:19, 21 March 2018

Reaction RXN-12339

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7277, sphingolipid biosynthesis (mammals): PWY-7277
    • 5 reactions found over 7 reactions in the full pathway
  • PWY3DJ-11281, sphingomyelin metabolism: PWY3DJ-11281
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links