Difference between revisions of "3.1.13.1-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=INOPHOSPHOR-RXN INOPHOSPHOR-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expas...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.13.1-RXN 3.1.13.1-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** exosome_complex_exonu...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=INOPHOSPHOR-RXN INOPHOSPHOR-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.13.1-RXN 3.1.13.1-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** exosome_complex_exonuclease
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.2.1 EC-2.4.2.1]
+
** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1]
 
* Synonym(s):
 
* Synonym(s):
 +
** Ribonuclease II
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Pi]][c] '''+''' 1 [[INOSINE]][c] '''<=>''' 1 [[HYPOXANTHINE]][c] '''+''' 1 [[RIBOSE-1P]][c]
+
** n [[WATER]][c] '''+''' 1 [[RNASE-II-DEGRADATION-SUBSTRATE-MRNA]][c] '''=>''' n [[Nucleoside-Monophosphates]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 phosphate[c] '''+''' 1 inosine[c] '''<=>''' 1 hypoxanthine[c] '''+''' 1 &alpha;-D-ribose-1-phosphate[c]
+
** n H2O[c] '''+''' 1 RNase II degradation substrate mRNA[c] '''=>''' n a nucleoside 5'-monophosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_11613]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_11612]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 26: Line 30:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27646 27646]
+
** [http://www.uniprot.org/uniprot/P30850 P30850]
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01863 R01863]
+
{{#set: common name=exosome_complex_exonuclease}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: ec number=EC-3.1.13.1}}
−
{{#set: ec number=EC-2.4.2.1}}
+
{{#set: common name=Ribonuclease II}}
−
{{#set: in pathway=PWY-6609|PWY0-1296|SALVADEHYPOX-PWY}}
+
{{#set: gene associated=Tiso_gene_11613|Tiso_gene_11612}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:19, 21 March 2018

Reaction 3.1.13.1-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • exosome_complex_exonuclease
  • ec number:
  • Synonym(s):
    • Ribonuclease II

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3.1.13.1-RXN&oldid=40895"