Difference between revisions of "1.2.1.25-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_17207 == * left end position: ** 959 * transcription direction: ** POSITIVE * right end position: ** 2595 * centisome position: ** 24.89615...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.25-RXN 1.2.1.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-2-oxobutanoa...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17207 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.25-RXN 1.2.1.25-RXN] ==
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* left end position:
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* direction:
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** 959
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 3-methyl-2-oxobutanoate_dehydrogenase
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* right end position:
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* ec number:
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** 2595
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** [http://enzyme.expasy.org/EC/1.2.1.25 EC-1.2.1.25]
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* centisome position:
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** 24.896158   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[5.1.1.16-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[CO-A]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ISOBUTYRYL-COA]][c]
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* [[5.1.1.18-RXN]]
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* With common name(s):
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** [[pantograph]]-[[creinhardtii]]
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** 1 coenzyme A[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 CO2[c] '''+''' 1 isobutanoyl-CoA[c]
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* [[RXN-15122]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** experimental_annotation
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* Gene: [[Tiso_gene_3260]]
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***ec-number
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** Source: [[annotation-experimental_annotation]]
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* [[RXN0-2381]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_11793]]
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* [[RXN0-2382]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[THREDEHYD-RXN]]
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== Pathways ==
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** in-silico_annotation
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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***ec-number
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** '''8''' reactions found over '''8''' reactions in the full pathway
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** experimental_annotation
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== Reconstruction information  ==
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***ec-number
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* Category: [[annotation]]
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* [[TRYPSYN-RXN]]
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** Source: [[annotation-experimental_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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* [[ILEUSYN-PWY]]
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*** Tool: [[pathwaytools]]
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* [[PWY-5437]]
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* [[PWY-6196]]
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* [[PWY66-428]]
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* [[PWY-5826]]
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* [[TRPSYN-PWY]]
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* [[PWY-6455]]
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* [[PWY-6949]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=959}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13997 13997]
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{{#set: right end position=2595}}
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* LIGAND-RXN:
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{{#set: centisome position=24.896158    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01210 R01210]
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{{#set: reaction associated=5.1.1.16-RXN|5.1.1.18-RXN|RXN-15122|RXN0-2381|RXN0-2382|THREDEHYD-RXN|TRYPSYN-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=ILEUSYN-PWY|PWY-5437|PWY-6196|PWY66-428|PWY-5826|TRPSYN-PWY|PWY-6455|PWY-6949}}
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{{#set: common name=3-methyl-2-oxobutanoate_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.25}}
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{{#set: gene associated=Tiso_gene_3260|Tiso_gene_11793}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:20, 21 March 2018

Reaction 1.2.1.25-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-methyl-2-oxobutanoate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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