Difference between revisions of "CPD-13612"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] == * direction: ** REVERSIBLE * co...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13612 CPD-13612] == * smiles: ** CCCCCCCCCCCCCCCC(C(CO)[N+])O * common name: ** D-erythro-s...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13612 CPD-13612] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CCCCCCCCCCCCCCCC(C(CO)[N+])O
 
* common name:
 
* common name:
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** cysteine
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** D-erythro-sphinganine
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/4.2.1.22 EC-4.2.1.22]
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** InChIKey=OTKJDMGTUTTYMP-ZWKOTPCHSA-O
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* molecular weight:
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** 302.519   
 
* Synonym(s):
 
* Synonym(s):
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** sphinganine
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** D-erythro-dihydrosphingosine
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** D-erythro-DHS
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** D-erythro-dihydrosphingosine (C18)
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** D-erythro-sphinganine (C18)
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** dihydrosphingosine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN3DJ-118]]
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** 1 [[SER]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[L-CYSTATHIONINE]][c]
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* [[SPHINGANINE-KINASE-RXN]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 L-serine[c] '''+''' 1 L-homocysteine[c] '''<=>''' 1 H2O[c] '''+''' 1 L-cystathionine[c]
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* [[3-DEHYDROSPHINGANINE-REDUCTASE-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[RXN-13733]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7852]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3732]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIPID_MAPS : LMSP01020001
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10112 10112]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878428 46878428]
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** [http://www.genome.jp/dbget-bin/www_bget?R01290 R01290]
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* HMDB : HMDB00269
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* UNIPROT:
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P32232 P32232]
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** [http://www.chemspider.com/Chemical-Structure.82609.html 82609]
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** [http://www.uniprot.org/uniprot/P32582 P32582]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P35520 P35520]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57817 57817]
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** [http://www.uniprot.org/uniprot/Q9YCN5 Q9YCN5]
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* METABOLIGHTS : MTBLC57817
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** [http://www.uniprot.org/uniprot/Q12633 Q12633]
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{{#set: smiles=CCCCCCCCCCCCCCCC(C(CO)[N+])O}}
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** [http://www.uniprot.org/uniprot/P72662 P72662]
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{{#set: common name=D-erythro-sphinganine}}
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** [http://www.uniprot.org/uniprot/O59701 O59701]
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{{#set: inchi key=InChIKey=OTKJDMGTUTTYMP-ZWKOTPCHSA-O}}
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{{#set: direction=REVERSIBLE}}
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{{#set: molecular weight=302.519    }}
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{{#set: common name=cysteine}}
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{{#set: common name=sphinganine|D-erythro-dihydrosphingosine|D-erythro-DHS|D-erythro-dihydrosphingosine (C18)|D-erythro-sphinganine (C18)|dihydrosphingosine}}
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{{#set: ec number=EC-4.2.1.22}}
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{{#set: consumed by=RXN3DJ-118|SPHINGANINE-KINASE-RXN}}
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{{#set: gene associated=Tiso_gene_7852|Tiso_gene_3732}}
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{{#set: produced by=3-DEHYDROSPHINGANINE-REDUCTASE-RXN}}
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{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-I9|PWY-801}}
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{{#set: reversible reaction associated=RXN-13733}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:20, 21 March 2018

Metabolite CPD-13612

  • smiles:
    • CCCCCCCCCCCCCCCC(C(CO)[N+])O
  • common name:
    • D-erythro-sphinganine
  • inchi key:
    • InChIKey=OTKJDMGTUTTYMP-ZWKOTPCHSA-O
  • molecular weight:
    • 302.519
  • Synonym(s):
    • sphinganine
    • D-erythro-dihydrosphingosine
    • D-erythro-DHS
    • D-erythro-dihydrosphingosine (C18)
    • D-erythro-sphinganine (C18)
    • dihydrosphingosine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • LIPID_MAPS : LMSP01020001
  • PUBCHEM:
  • HMDB : HMDB00269
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57817
"CCCCCCCCCCCCCCCC(C(CO)[N+])O" cannot be used as a page name in this wiki.




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