Difference between revisions of "CYSTATHIONINE-BETA-SYNTHASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8222 CPD-8222] == * smiles: ** C=C(C1(CC(C(CC1)(C)O)O))C * inchi key: ** InChIKey=WKZWTZTZW...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] == * direction: ** REVERSIBLE * co...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8222 CPD-8222] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] ==
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* smiles:
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* direction:
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** C=C(C1(CC(C(CC1)(C)O)O))C
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** REVERSIBLE
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* inchi key:
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** InChIKey=WKZWTZTZWGWEGE-UTLUCORTSA-N
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* common name:
 
* common name:
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** (1S,2S,4R)-limonene-1,2-diol
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** cysteine
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* molecular weight:
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* ec number:
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** 170.251   
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** [http://enzyme.expasy.org/EC/4.2.1.22 EC-4.2.1.22]
 
* Synonym(s):
 
* Synonym(s):
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** (1R,2R,4S)-menth-8-ene-1,2-diol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[3.3.2.8-RXN]]
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** 1 [[SER]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[L-CYSTATHIONINE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-9464]]
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** 1 L-serine[c] '''+''' 1 L-homocysteine[c] '''<=>''' 1 H2O[c] '''+''' 1 L-cystathionine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7852]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_3732]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* UM-BBD-CPD : c0673
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* RHEA:
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* LIPID_MAPS : LMPR0102090016
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10112 10112]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=441246 441246]
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** [http://www.genome.jp/dbget-bin/www_bget?R01290 R01290]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C07276 C07276]
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** [http://www.uniprot.org/uniprot/P32232 P32232]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P32582 P32582]
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** [http://www.chemspider.com/Chemical-Structure.390019.html 390019]
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** [http://www.uniprot.org/uniprot/P35520 P35520]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9YCN5 Q9YCN5]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18515 18515]
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** [http://www.uniprot.org/uniprot/Q12633 Q12633]
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{{#set: smiles=C=C(C1(CC(C(CC1)(C)O)O))C}}
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** [http://www.uniprot.org/uniprot/P72662 P72662]
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{{#set: inchi key=InChIKey=WKZWTZTZWGWEGE-UTLUCORTSA-N}}
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** [http://www.uniprot.org/uniprot/O59701 O59701]
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{{#set: common name=(1S,2S,4R)-limonene-1,2-diol}}
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{{#set: direction=REVERSIBLE}}
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{{#set: molecular weight=170.251    }}
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{{#set: common name=cysteine}}
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{{#set: common name=(1R,2R,4S)-menth-8-ene-1,2-diol}}
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{{#set: ec number=EC-4.2.1.22}}
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{{#set: produced by=3.3.2.8-RXN}}
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{{#set: gene associated=Tiso_gene_7852|Tiso_gene_3732}}
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{{#set: reversible reaction associated=RXN-9464}}
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{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-I9|PWY-801}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:20, 21 March 2018

Reaction CYSTATHIONINE-BETA-SYNTHASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • cysteine
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-serine[c] + 1 L-homocysteine[c] <=> 1 H2O[c] + 1 L-cystathionine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HOMOCYSDEGR-PWY, L-cysteine biosynthesis III (from L-homocysteine): HOMOCYSDEGR-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine): PWY-I9
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-801, L-homocysteine and L-cysteine interconversion: PWY-801
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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