Difference between revisions of "SERSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXAL-4-DEHYDROGENASE-RXN PYRIDOXAL-4-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TA...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXAL-4-DEHYDROGENASE-RXN PYRIDOXAL-4-DEHYDROGENASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** aldo_keto_reductase
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** L-serine biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.107 EC-1.1.1.107]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
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** 1 [[NAD]][c] '''+''' 1 [[PYRIDOXAL]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-375]][c]
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* [[PGLYCDEHYDROG-RXN]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 NAD+[c] '''+''' 1 pyridoxal[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 4-pyridoxolactone[c]
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*** [[Tiso_gene_6223]]
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*** [[Tiso_gene_6224]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_17123]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_15687]]
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* [[Tiso_gene_6340]]
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*** [[Tiso_gene_15686]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_18904]]
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***EC-NUMBER
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** 7 reconstruction source(s) associated:
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* [[Tiso_gene_9885]]
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*** [[annotation-experimental_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-esiliculosus]]
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***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_13083]]
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*** [[orthology-athaliana]]
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-synechocystis]]
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***AUTOMATED-NAME-MATCH
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*** [[manual-primary_network]]
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== Pathways  ==
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*** [[orthology-creinhardtii]]
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* [[PWY-5499]], vitamin B6 degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5499 PWY-5499]
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* [[PSERTRANSAM-RXN]]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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** 2 associated gene(s):
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== Reconstruction information  ==
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*** [[Tiso_gene_17123]]
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* [[annotation]]:
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*** [[Tiso_gene_15686]]
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** [[pathwaytools]]:
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** 4 reconstruction source(s) associated:
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*** [[experimental_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN0-5114]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6236]]
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*** [[Tiso_gene_16271]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21339 21339]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R01707 R01707]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=aldo_keto_reductase}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: ec number=EC-1.1.1.107}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: gene associated=Tiso_gene_6340|Tiso_gene_9885|Tiso_gene_13083}}
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{{#set: common name=L-serine biosynthesis}}
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{{#set: in pathway=PWY-5499}}
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{{#set: reaction found=3}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=3}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:25, 21 March 2018

Pathway SERSYN-PWY

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SERSYN-PWY&oldid=41451"