Difference between revisions of "PWY-5057"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057] ==
 
* taxonomic range:
 
* taxonomic range:
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
** formaldehyde assimilation I (serine pathway)
+
** L-valine degradation II
 
* Synonym(s):
 
* Synonym(s):
 +
** Ehrlich pathway
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''5''' reactions found over '''13''' reactions in the full pathway
+
  '''2''' reactions found over '''3''' reactions in the full pathway
* [[2PGADEHYDRAT-RXN]]
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
** 4 associated gene(s):
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** 2 associated gene(s):
*** [[Tiso_gene_14718]]
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*** [[Tiso_gene_18403]]
*** [[Tiso_gene_8720]]
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*** [[Tiso_gene_14984]]
*** [[Tiso_gene_5619]]
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** 5 reconstruction source(s) associated:
*** [[Tiso_gene_13317]]
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** 7 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[GLYOHMETRANS-RXN]]
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** 4 associated gene(s):
+
*** [[Tiso_gene_16153]]
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*** [[Tiso_gene_16154]]
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*** [[Tiso_gene_18652]]
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*** [[Tiso_gene_7776]]
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** 4 reconstruction source(s) associated:
+
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-synechocystis]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
* [[MALATE-DEH-RXN]]
+
* [[RXN-7657]]
** 2 associated gene(s):
+
** 5 associated gene(s):
*** [[Tiso_gene_1990]]
+
*** [[Tiso_gene_6562]]
*** [[Tiso_gene_2323]]
+
*** [[Tiso_gene_5425]]
** 7 reconstruction source(s) associated:
+
*** [[Tiso_gene_7649]]
*** [[annotation-experimental_annotation]]
+
*** [[Tiso_gene_6563]]
*** [[orthology-esiliculosus]]
+
*** [[Tiso_gene_5424]]
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
+
*** [[orthology-synechocystis]]
+
*** [[manual-primary_network]]
+
*** [[orthology-creinhardtii]]
+
* [[RXN-15513]]
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** 8 associated gene(s):
+
*** [[Tiso_gene_7201]]
+
*** [[Tiso_gene_9922]]
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*** [[Tiso_gene_2841]]
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*** [[Tiso_gene_14530]]
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*** [[Tiso_gene_9923]]
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*** [[Tiso_gene_16271]]
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*** [[Tiso_gene_2365]]
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*** [[Tiso_gene_14664]]
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** 2 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[annotation-in-silico_annotation]]
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* [[RXN-2881]]
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** 0 associated gene:
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
* [http://metacyc.org/META/NEW-IMAGE?object=GKI-RXN GKI-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7643 RXN-7643]
* [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRUVATE-REDUCTASE-RXN HYDROXYPYRUVATE-REDUCTASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALATE--COA-LIGASE-RXN MALATE--COA-LIGASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2802 RXN-2802]
+
* [http://metacyc.org/META/NEW-IMAGE?object=SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN]
+
 
== External links  ==
 
== External links  ==
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
{{#set: common name=formaldehyde assimilation I (serine pathway)}}
+
{{#set: taxonomic range=TAX-4751}}
{{#set: reaction found=5}}
+
{{#set: common name=L-valine degradation II}}
{{#set: total reaction=13}}
+
{{#set: common name=Ehrlich pathway}}
{{#set: completion rate=38.0}}
+
{{#set: reaction found=2}}
 +
{{#set: total reaction=3}}
 +
{{#set: completion rate=67.0}}

Latest revision as of 19:20, 21 March 2018

Pathway PWY-5057

  • taxonomic range:
  • common name:
    • L-valine degradation II
  • Synonym(s):
    • Ehrlich pathway

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links