Difference between revisions of "PWY-4661"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec numb...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4661 PWY-4661] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4661 PWY-4661] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** polyketide_synthase
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** 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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* Synonym(s):
 
* Synonym(s):
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** lipid-independent phytic acid biosynthesis
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** lipid-independent InsP6 biosynthesis
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** lipid-independent phytate biosynthesis
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** hexakisphosphate biosynthesis (lipid-independent)
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** phytate biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''7''' reactions in the full pathway
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** 1 [[R-3-hydroxystearoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Octadec-2-enoyl-ACPs]][c]
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* [[2.7.1.134-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a (3R)-3-hydroxystearoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans-octadec-2-enoyl-[acp][c]
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*** [[Tiso_gene_15232]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_500]]
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* [[MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_7167]]
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* [[Tiso_gene_135]]
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** 3 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_136]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[RXN-7163]]
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***EC-NUMBER
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** 1 associated gene(s):
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* [[Tiso_gene_13394]]
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*** [[Tiso_gene_15282]]
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_6884]]
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== Reaction(s) not found ==
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** EXPERIMENTAL_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-1-KINASE-RXN MYO-INOSITOL-1-KINASE-RXN]
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***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7202 RXN-7202]
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* [[Tiso_gene_10876]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7203 RXN-7203]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7204 RXN-7204]
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: common name=lipid-independent phytic acid biosynthesis|lipid-independent InsP6 biosynthesis|lipid-independent phytate biosynthesis|hexakisphosphate biosynthesis (lipid-independent)|phytate biosynthesis}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: reaction found=3}}
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{{#set: gene associated=Tiso_gene_500|Tiso_gene_135|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_6884|Tiso_gene_10876}}
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{{#set: total reaction=7}}
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{{#set: in pathway=PWY-5989|PWY3O-355}}
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{{#set: completion rate=43.0}}
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{{#set: reconstruction category=manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:20, 21 March 2018

Pathway PWY-4661

  • taxonomic range:
  • common name:
    • 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
  • Synonym(s):
    • lipid-independent phytic acid biosynthesis
    • lipid-independent InsP6 biosynthesis
    • lipid-independent phytate biosynthesis
    • hexakisphosphate biosynthesis (lipid-independent)
    • phytate biosynthesis

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-4661&oldid=41023"