Difference between revisions of "PWY-699"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10769 RXN-10769] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** beta-glucosidase-lik...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10769 RXN-10769] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
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** ORF
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** brassinosteroid biosynthesis I
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** beta-glucosidase-like_chloroplastic
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** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
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** beta_glucosidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''11''' reactions found over '''25''' reactions in the full pathway
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** 1 [[CPD-11641]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-182]][c]
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* [[RXN-11535]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 4-methylumbelliferyl glucoside[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 4-methylumbelliferone[c]
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*** [[Tiso_gene_8263]]
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*** [[Tiso_gene_3577]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_5836]]
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* [[RXN-4241]]
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** IN-SILICO_ANNOTATION
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** 2 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_8263]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_3577]]
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_2344]]
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*** [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-711]]
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* [[Tiso_gene_15067]]
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** 1 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_14327]]
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_6188]]
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*** [[orthology-athaliana]]
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** IN-SILICO_ANNOTATION
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* [[RXN-715]]
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***EC-NUMBER
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** 2 associated gene(s):
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* [[Tiso_gene_6007]]
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*** [[Tiso_gene_8263]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_3577]]
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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* [[RXN-716]]
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* [[Tiso_gene_2843]]
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** 2 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_8263]]
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* [[Tiso_gene_6497]]
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*** [[Tiso_gene_3577]]
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** [[pantograph]]-[[esiliculosus]]
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_13306]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[RXN-717]]
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***EC-NUMBER
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** 2 associated gene(s):
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* [[Tiso_gene_13305]]
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*** [[Tiso_gene_8263]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_3577]]
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-esiliculosus]]
−
***EC-NUMBER
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* [[RXN-773]]
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* [[Tiso_gene_8669]]
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** 2 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_3577]]
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***EC-NUMBER
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*** [[Tiso_gene_8263]]
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** EXPERIMENTAL_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_15066]]
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* [[RXN-774]]
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** IN-SILICO_ANNOTATION
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** 2 associated gene(s):
−
***EC-NUMBER
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*** [[Tiso_gene_8263]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_3577]]
−
***EC-NUMBER
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_3467]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[RXN-775]]
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***EC-NUMBER
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** 2 associated gene(s):
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_3577]]
−
***EC-NUMBER
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*** [[Tiso_gene_8263]]
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* [[Tiso_gene_10001]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_6187]]
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* [[RXN-778]]
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** IN-SILICO_ANNOTATION
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** 2 associated gene(s):
−
***EC-NUMBER
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*** [[Tiso_gene_3577]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_8263]]
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* [[RXN-779]]
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* Category: [[orthology]]
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** 2 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_3577]]
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_8263]]
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* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11536 RXN-11536]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16171 RXN-16171]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16172 RXN-16172]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16173 RXN-16173]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-709 RXN-709]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-710 RXN-710]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-712 RXN-712]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-713 RXN-713]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-714 RXN-714]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-718 RXN-718]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-719 RXN-719]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-720 RXN-720]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-776 RXN-776]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-777 RXN-777]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
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{{#set: common name=ORF}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-699 PWY-699]
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{{#set: common name=beta-glucosidase-like_chloroplastic}}
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{{#set: taxonomic range=TAX-3193}}
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{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
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{{#set: common name=brassinosteroid biosynthesis I}}
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{{#set: common name=beta_glucosidase}}
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{{#set: reaction found=11}}
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{{#set: ec number=EC-3.2.1.21}}
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{{#set: total reaction=25}}
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{{#set: gene associated=Tiso_gene_5836|Tiso_gene_2344|Tiso_gene_15067|Tiso_gene_6188|Tiso_gene_6007|Tiso_gene_2843|Tiso_gene_6497|Tiso_gene_13306|Tiso_gene_13305|Tiso_gene_8669|Tiso_gene_15066|Tiso_gene_3467|Tiso_gene_10001|Tiso_gene_6187}}
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{{#set: completion rate=44.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:20, 21 March 2018

Pathway PWY-699

  • taxonomic range:
  • common name:
    • brassinosteroid biosynthesis I
  • Synonym(s):

Reaction(s) found

11 reactions found over 25 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-699&oldid=41030"