Difference between revisions of "RXN-14074"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14074 RXN-14074] == * direction: ** LEFT-TO-RIGHT * common name: ** adenylate_kinase_domain-con...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14074 RXN-14074] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** gibberellin biosynthesis IV (Gibberella fujikuroi)
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** adenylate_kinase_domain-containing_protein_1
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.4 EC-2.7.4.4]
 
* Synonym(s):
 
* Synonym(s):
** GA3 biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''6''' reactions found over '''15''' reactions in the full pathway
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* With identifiers:
* [[1.14.13.78-RXN]]
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** 1 [[AMP]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[ADP]][c]
** 2 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_1547]]
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** 1 AMP[c] '''+''' 1 GTP[c] '''=>''' 1 GDP[c] '''+''' 1 ADP[c]
*** [[Tiso_gene_8263]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
* [[1.14.13.79-RXN]]
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* Gene: [[Tiso_gene_195]]
** 2 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
*** [[Tiso_gene_8263]]
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*** Assignment: EC-NUMBER
*** [[Tiso_gene_3577]]
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== Pathways  ==
** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
*** [[orthology-esiliculosus]]
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* Category: [[annotation]]
* [[RXN-5242]]
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** Source: [[annotation-in-silico_annotation]]
** 2 associated gene(s):
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*** Tool: [[pathwaytools]]
*** [[Tiso_gene_8263]]
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*** [[Tiso_gene_1547]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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* [[RXN-7580]]
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** 2 associated gene(s):
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*** [[Tiso_gene_8263]]
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*** [[Tiso_gene_1547]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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* [[RXN1F-160]]
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** 2 associated gene(s):
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*** [[Tiso_gene_3577]]
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*** [[Tiso_gene_8263]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN1F-161]]
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** 2 associated gene(s):
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*** [[Tiso_gene_8263]]
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*** [[Tiso_gene_3577]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6545 RXN-6545]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6549 RXN-6549]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7617 RXN-7617]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7619 RXN-7619]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7621 RXN-7621]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7624 RXN-7624]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7625 RXN-7625]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7634 RXN-7634]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-166 RXN1F-166]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-4751}}
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* RHEA:
{{#set: common name=gibberellin biosynthesis IV (Gibberella fujikuroi)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29864 29864]
{{#set: common name=GA3 biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: reaction found=6}}
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{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
{{#set: total reaction=15}}
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{{#set: ec number=EC-2.7.4.4}}
{{#set: completion rate=40.0}}
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{{#set: gene associated=Tiso_gene_195}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:21, 21 March 2018

Reaction RXN-14074

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • adenylate_kinase_domain-containing_protein_1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 AMP[c] + 1 GTP[c] => 1 GDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links