Difference between revisions of "RXN-7978"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13357 CPD-13357] == * smiles: ** CC(C)(O)C(O)C(=O)[O-] * inchi key: ** InChIKey=JTEYKUFKXGD...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7978 RXN-7978] == * direction: ** LEFT-TO-RIGHT * common name: ** zeaxanthin_epoxidase * Synony...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13357 CPD-13357] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7978 RXN-7978] ==
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* smiles:
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* direction:
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** CC(C)(O)C(O)C(=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=JTEYKUFKXGDTEU-VKHMYHEASA-M
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* common name:
 
* common name:
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** (2R)-2,3-dihydroxy-3-methylbutanoate
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** zeaxanthin_epoxidase
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* molecular weight:
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** 133.124   
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* Synonym(s):
 
* Synonym(s):
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** (R)-2,3-dihydroxy-3-methylbutanoate
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** Zea-epoxidase
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** (R)-2,3-dihydroxy-isovalerate
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[DMHL]]
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* With identifiers:
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* [[DHAD_3mob_h]]
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** 2 [[PROTON]][c] '''+''' 1 [[CPD1F-130]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[CPD1F-131]][c] '''+''' 1 [[WATER]][c]
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* [[DHAD_3mob]]
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* With common name(s):
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* [[DIHYDROXYISOVALDEHYDRAT-RXN]]
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** 2 H+[c] '''+''' 1 zeaxanthin[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 oxygen[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 antheraxanthin[c] '''+''' 1 H2O[c]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[ACETOLACTREDUCTOISOM-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6386]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_10919]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?C04272 C04272]
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** [http://www.genome.jp/dbget-bin/www_bget?R07199 R07199]
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* CHEMSPIDER:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.chemspider.com/Chemical-Structure.19951355.html 19951355]
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{{#set: common name=zeaxanthin_epoxidase}}
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* CHEBI:
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{{#set: common name=Zea-epoxidase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=49072 49072]
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{{#set: gene associated=Tiso_gene_6386|Tiso_gene_10919}}
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* PUBCHEM:
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{{#set: in pathway=PWY-5945}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23615351 23615351]
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{{#set: reconstruction category=orthology|annotation}}
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* HMDB : HMDB12141
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: smiles=CC(C)(O)C(O)C(=O)[O-]}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=JTEYKUFKXGDTEU-VKHMYHEASA-M}}
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{{#set: common name=(2R)-2,3-dihydroxy-3-methylbutanoate}}
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{{#set: molecular weight=133.124    }}
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{{#set: common name=(R)-2,3-dihydroxy-3-methylbutanoate|(R)-2,3-dihydroxy-isovalerate}}
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{{#set: consumed by=DMHL|DHAD_3mob_h|DHAD_3mob|DIHYDROXYISOVALDEHYDRAT-RXN}}
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{{#set: reversible reaction associated=ACETOLACTREDUCTOISOM-RXN}}
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Latest revision as of 19:21, 21 March 2018

Reaction RXN-7978

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • zeaxanthin_epoxidase
  • Synonym(s):
    • Zea-epoxidase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5945, zeaxanthin, antheraxanthin and violaxanthin interconversion: PWY-5945
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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