Difference between revisions of "CPD1F-129"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoenol...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-129 CPD1F-129] == * smiles: ** CC(C=CC=C(C=CC1(C(C)(C)CCCC=1C))C)=CC=CC=C(C=CC=C(C=CC2(=C...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-129 CPD1F-129] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C=CC=C(C=CC1(C(C)(C)CCCC=1C))C)=CC=CC=C(C=CC=C(C=CC2(=C(CCCC(C)(C)2)C))C)C
 
* common name:
 
* common name:
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** Phosphoenolpyruvate carboxykinase [ATP]
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** all-trans-β-carotene
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/4.1.1.49 EC-4.1.1.49]
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** InChIKey=OENHQHLEOONYIE-JLTXGRSLSA-N
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* molecular weight:
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** 536.882   
 
* Synonym(s):
 
* Synonym(s):
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** β-carotene
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-13374]]
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** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[RXN-8025]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 oxaloacetate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphoenolpyruvate[c] '''+''' 1 CO2[c]
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* [[RXN1F-151]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_19475]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
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** '''5''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 7235-40-7
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18617 18617]
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* LIPID_MAPS : LMPR01070001
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5280489 5280489]
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* UNIPROT:
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* HMDB : HMDB00561
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** [http://www.uniprot.org/uniprot/P10963 P10963]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
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** [http://www.genome.jp/dbget-bin/www_bget?C02094 C02094]
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** [http://www.uniprot.org/uniprot/P43923 P43923]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P22259 P22259]
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** [http://www.chemspider.com/Chemical-Structure.4444129.html 4444129]
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** [http://www.uniprot.org/uniprot/P42066 P42066]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P49292 P49292]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17579 17579]
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** [http://www.uniprot.org/uniprot/O49547 O49547]
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* METABOLIGHTS : MTBLC17579
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** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
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{{#set: smiles=CC(C=CC=C(C=CC1(C(C)(C)CCCC=1C))C)=CC=CC=C(C=CC=C(C=CC2(=C(CCCC(C)(C)2)C))C)C}}
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** [http://www.uniprot.org/uniprot/Q39294 Q39294]
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{{#set: common name=all-trans-β-carotene}}
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** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
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{{#set: inchi key=InChIKey=OENHQHLEOONYIE-JLTXGRSLSA-N}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=536.882    }}
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{{#set: common name=Phosphoenolpyruvate carboxykinase [ATP]}}
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{{#set: common name=β-carotene}}
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{{#set: ec number=EC-4.1.1.49}}
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{{#set: consumed by=RXN-13374|RXN-8025}}
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{{#set: gene associated=Tiso_gene_19475}}
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{{#set: produced by=RXN1F-151}}
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{{#set: in pathway=PWY-561|PWY-7117|GLUCONEO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Latest revision as of 19:25, 21 March 2018

Metabolite CPD1F-129

  • smiles:
    • CC(C=CC=C(C=CC1(C(C)(C)CCCC=1C))C)=CC=CC=C(C=CC=C(C=CC2(=C(CCCC(C)(C)2)C))C)C
  • common name:
    • all-trans-β-carotene
  • inchi key:
    • InChIKey=OENHQHLEOONYIE-JLTXGRSLSA-N
  • molecular weight:
    • 536.882
  • Synonym(s):
    • β-carotene

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 7235-40-7
  • LIPID_MAPS : LMPR01070001
  • PUBCHEM:
  • HMDB : HMDB00561
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC17579




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