Difference between revisions of "PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] == * direction: ** L...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** assimilatory_nitrate_reductase
+
** peptide-aspartate_beta-dioxygenase
−
** ORF
+
** aspartyl_asparaginyl_beta-hydroxylase
 +
** aspartyl_asparaginylbeta-hydroxylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
+
** [http://enzyme.expasy.org/EC/1.14.11.16 EC-1.14.11.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[NITRATE]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NITRITE]][c]
+
** 1 [[Protein-L-Aspartates]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 nitrate[c] '''=>''' 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 nitrite[c]
+
** 1 a [protein]-L-aspartate[c] '''+''' 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 a [protein]-3-hydroxy-L-aspartate[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16889]]
+
* Gene: [[Tiso_gene_7631]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_19054]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_17313]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_18918]]
+
* Gene: [[Tiso_gene_10501]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_17769]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_19156]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_16225]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_7632]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q39607 Q39607]
+
** [http://www.uniprot.org/uniprot/Q28056 Q28056]
−
** [http://www.uniprot.org/uniprot/Q41201 Q41201]
+
** [http://www.uniprot.org/uniprot/Q93178 Q93178]
−
** [http://www.uniprot.org/uniprot/P17569 P17569]
+
−
** [http://www.uniprot.org/uniprot/P54233 P54233]
+
−
** [http://www.uniprot.org/uniprot/P36841 P36841]
+
−
** [http://www.uniprot.org/uniprot/P27967 P27967]
+
−
** [http://www.uniprot.org/uniprot/P27969 P27969]
+
−
** [http://www.uniprot.org/uniprot/P11035 P11035]
+
−
** [http://www.uniprot.org/uniprot/P08509 P08509]
+
−
** [http://www.uniprot.org/uniprot/P11605 P11605]
+
−
** [http://www.uniprot.org/uniprot/P23312 P23312]
+
−
** [http://www.uniprot.org/uniprot/P17570 P17570]
+
−
** [http://www.uniprot.org/uniprot/P16081 P16081]
+
−
** [http://www.uniprot.org/uniprot/Q01170 Q01170]
+
−
** [http://www.uniprot.org/uniprot/P39865 P39865]
+
−
** [http://www.uniprot.org/uniprot/P11832 P11832]
+
−
** [http://www.uniprot.org/uniprot/P39869 P39869]
+
−
** [http://www.uniprot.org/uniprot/Q43265 Q43265]
+
−
** [http://www.uniprot.org/uniprot/P43101 P43101]
+
−
** [http://www.uniprot.org/uniprot/P43100 P43100]
+
−
** [http://www.uniprot.org/uniprot/Q42497 Q42497]
+
−
** [http://www.uniprot.org/uniprot/P39866 P39866]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=assimilatory_nitrate_reductase}}
+
{{#set: common name=peptide-aspartate_beta-dioxygenase}}
−
{{#set: common name=ORF}}
+
{{#set: common name=aspartyl_asparaginyl_beta-hydroxylase}}
−
{{#set: ec number=EC-1.7.1.1}}
+
{{#set: common name=aspartyl_asparaginylbeta-hydroxylase}}
−
{{#set: gene associated=Tiso_gene_16889|Tiso_gene_18918}}
+
{{#set: ec number=EC-1.14.11.16}}
−
{{#set: in pathway=PWY-381}}
+
{{#set: gene associated=Tiso_gene_7631|Tiso_gene_19054|Tiso_gene_17313|Tiso_gene_10501|Tiso_gene_17769|Tiso_gene_19156|Tiso_gene_16225|Tiso_gene_7632}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:23, 21 March 2018

Reaction PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • peptide-aspartate_beta-dioxygenase
    • aspartyl_asparaginyl_beta-hydroxylase
    • aspartyl_asparaginylbeta-hydroxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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