Difference between revisions of "RXN-4305"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4305 RXN-4305] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4305 RXN-4305] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.5.1.112 EC-2.5.1.112]
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** octane oxidation
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[R222-RXN]]
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** 1 [[ADP]][c] '''+''' 1 [[CPD-4211]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-4203]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 ADP[c] '''+''' 1 dimethylallyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 N6-(Δ2-isopentenyl)-adenosine 5'-diphosphate[c]
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*** [[annotation-in-silico_annotation]]
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* [[R223-RXN]]
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== Genes associated with this reaction  ==
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** 9 associated gene(s):
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_348]]
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* Gene: [[Tiso_gene_3274]]
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*** [[Tiso_gene_136]]
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_10876]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_13394]]
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== Pathways  ==
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*** [[Tiso_gene_500]]
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* [[PWY-2681]], trans-zeatin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2681 PWY-2681]
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*** [[Tiso_gene_7855]]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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*** [[Tiso_gene_4191]]
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== Reconstruction information  ==
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*** [[Tiso_gene_135]]
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* Category: [[orthology]]
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*** [[Tiso_gene_9394]]
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** Source: [[orthology-athaliana]]
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** 3 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ALKANE-1-MONOOXYGENASE-RXN ALKANE-1-MONOOXYGENASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R221-RXN R221-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RUBREDOXIN--NAD+-REDUCTASE-RXN RUBREDOXIN--NAD+-REDUCTASE-RXN]
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== External links  ==
 
== External links  ==
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* UM-BBD-PWY : oct
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08052 R08052]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=octane oxidation}}
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{{#set: ec number=EC-2.5.1.112}}
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{{#set: reaction found=2}}
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{{#set: gene associated=Tiso_gene_3274}}
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{{#set: total reaction=5}}
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{{#set: in pathway=PWY-2681}}
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{{#set: completion rate=40.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:24, 21 March 2018

Reaction RXN-4305

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ADP[c] + 1 dimethylallyl diphosphate[c] => 1 diphosphate[c] + 1 N6-(Δ2-isopentenyl)-adenosine 5'-diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2681, trans-zeatin biosynthesis: PWY-2681
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-4305&oldid=41396"