Difference between revisions of "PEPCARBOXYKIN-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7199 PWY-7199] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-554915 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoenol...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7199 PWY-7199] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-554915 TAX-554915]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* common name:
 
* common name:
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** pyrimidine deoxyribonucleosides salvage
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** Phosphoenolpyruvate carboxykinase [ATP]
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.49 EC-4.1.1.49]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[THYMIDYLATESYN-RXN]]
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** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_18478]]
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** 1 oxaloacetate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphoenolpyruvate[c] '''+''' 1 CO2[c]
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*** [[Tiso_gene_7708]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[manual-primary_network]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_19475]]
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== Reaction(s) not found ==
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** Source: [[annotation-experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM-RXN CYTIDEAM-RXN]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=DEOXYCYTIDINE-KINASE-RXN DEOXYCYTIDINE-KINASE-RXN]
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** Source: [[orthology-athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=DURIDKI-RXN DURIDKI-RXN]
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** Source: [[orthology-esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=THYKI-RXN THYKI-RXN]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
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** '''5''' reactions found over '''8''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-554915}}
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* RHEA:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18617 18617]
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{{#set: taxonomic range=TAX-33090}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
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{{#set: taxonomic range=TAX-2157}}
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* UNIPROT:
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{{#set: common name=pyrimidine deoxyribonucleosides salvage}}
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** [http://www.uniprot.org/uniprot/P10963 P10963]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
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{{#set: total reaction=5}}
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** [http://www.uniprot.org/uniprot/P43923 P43923]
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{{#set: completion rate=20.0}}
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** [http://www.uniprot.org/uniprot/P22259 P22259]
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** [http://www.uniprot.org/uniprot/P42066 P42066]
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** [http://www.uniprot.org/uniprot/P49292 P49292]
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** [http://www.uniprot.org/uniprot/O49547 O49547]
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** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
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** [http://www.uniprot.org/uniprot/Q39294 Q39294]
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** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Phosphoenolpyruvate carboxykinase [ATP]}}
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{{#set: ec number=EC-4.1.1.49}}
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{{#set: gene associated=Tiso_gene_19475}}
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{{#set: in pathway=PWY-561|GLUCONEO-PWY|PWY-7117}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|orthology-creinhardtii|orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:24, 21 March 2018

Reaction PEPCARBOXYKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphoenolpyruvate carboxykinase [ATP]
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-561, superpathway of glyoxylate cycle and fatty acid degradation: PWY-561
    • 5 reactions found over 8 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

"Phosphoenolpyruvate carboxykinase [ATP" cannot be used as a page name in this wiki.




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