Difference between revisions of "PWY-5942"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4305 RXN-4305] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5942 PWY-5942] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4305 RXN-4305] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5942 PWY-5942] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
** [http://enzyme.expasy.org/EC/2.5.1.112 EC-2.5.1.112]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** trans-lycopene biosynthesis I (bacteria)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''4''' reactions in the full pathway
** 1 [[CPD-4211]][c] '''+''' 1 [[ADP]][c] '''=>''' 1 [[CPD-4203]][c] '''+''' 1 [[PPI]][c]
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* [[PWY-6287]]
* With common name(s):
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** 0 associated gene:
** 1 dimethylallyl diphosphate[c] '''+''' 1 ADP[c] '''=>''' 1 N6-(Δ2-isopentenyl)-adenosine 5'-diphosphate[c] '''+''' 1 diphosphate[c]
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* [[RXNARA-8002]]
 
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** 1 associated gene(s):
== Genes associated with this reaction  ==
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*** [[Tiso_gene_15914]]
Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
* [[Tiso_gene_3274]]
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*** [[orthology-esiliculosus]]
** [[pantograph]]-[[athaliana]]
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== Reaction(s) not found ==
** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12412 RXN-12412]
== Pathways  ==
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* [[PWY-2681]], trans-zeatin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2681 PWY-2681]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
** [http://www.genome.jp/dbget-bin/www_bget?R08052 R08052]
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{{#set: taxonomic range=TAX-2157}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
{{#set: ec number=EC-2.5.1.112}}
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{{#set: common name=trans-lycopene biosynthesis I (bacteria)}}
{{#set: gene associated=Tiso_gene_3274}}
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{{#set: reaction found=2}}
{{#set: in pathway=PWY-2681}}
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{{#set: total reaction=4}}
{{#set: reconstruction category=orthology}}
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{{#set: completion rate=50.0}}
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:24, 21 March 2018

Pathway PWY-5942

  • taxonomic range:
  • common name:
    • trans-lycopene biosynthesis I (bacteria)
  • Synonym(s):

Reaction(s) found

2 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links