Difference between revisions of "HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_13134 == * left end position: ** 268 * transcription direction: ** NEGATIVE * right end position: ** 1714 * centisome position: ** 4.119274...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] == * direction: ** R...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_13134 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] ==
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* left end position:
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* direction:
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** 268
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** polyketide_synthase
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* right end position:
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* ec number:
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** 1714
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** [http://enzyme.expasy.org/EC/2.3.3.10 EC-2.3.3.10]
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* centisome position:
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** 4.1192746   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 1 [[CO-A]][c]
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***ec-number
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* With common name(s):
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* [[URITRANS-RXN]]
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** 1 H2O[c] '''+''' 1 acetoacetyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''+''' 1 coenzyme A[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9236]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14303]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_8563]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=268}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10188 10188]
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{{#set: right end position=1714}}
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* LIGAND-RXN:
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{{#set: centisome position=4.1192746    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
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{{#set: reaction associated=NAD+-ADP-RIBOSYLTRANSFERASE-RXN|URITRANS-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P13704 P13704]
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** [http://www.uniprot.org/uniprot/P22791 P22791]
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** [http://www.uniprot.org/uniprot/P54870 P54870]
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** [http://www.uniprot.org/uniprot/P54869 P54869]
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** [http://www.uniprot.org/uniprot/O51626 O51626]
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** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
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** [http://www.uniprot.org/uniprot/P17425 P17425]
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** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
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** [http://www.uniprot.org/uniprot/Q01581 Q01581]
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** [http://www.uniprot.org/uniprot/P54961 P54961]
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** [http://www.uniprot.org/uniprot/P54839 P54839]
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** [http://www.uniprot.org/uniprot/P54874 P54874]
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** [http://www.uniprot.org/uniprot/P54868 P54868]
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** [http://www.uniprot.org/uniprot/P54873 P54873]
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** [http://www.uniprot.org/uniprot/P93773 P93773]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=polyketide_synthase}}
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{{#set: ec number=EC-2.3.3.10}}
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{{#set: gene associated=Tiso_gene_9236|Tiso_gene_14303|Tiso_gene_8563}}
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{{#set: in pathway=PWY66-367|PWY-6174|PWY-922|PWY-7391|PWY-7571|PWY-7524}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:24, 21 March 2018

Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-367, ketogenesis: PWY66-367
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6174, mevalonate pathway II (archaea): PWY-6174
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-922, mevalonate pathway I: PWY-922
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-7571, ferrichrome A biosynthesis: PWY-7571
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7524, mevalonate pathway III (archaea): PWY-7524
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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