Difference between revisions of "FERMENTATION-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-129 CPD1F-129] == * smiles: ** CC(C=CC=C(C=CC1(C(C)(C)CCCC=1C))C)=CC=CC=C(C=CC=C(C=CC2(=C...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-129 CPD1F-129] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY] ==
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* smiles:
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* taxonomic range:
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** CC(C=CC=C(C=CC1(C(C)(C)CCCC=1C))C)=CC=CC=C(C=CC=C(C=CC2(=C(CCCC(C)(C)2)C))C)C
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* inchi key:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** InChIKey=OENHQHLEOONYIE-JLTXGRSLSA-N
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* common name:
 
* common name:
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** all-trans-β-carotene
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** mixed acid fermentation
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* molecular weight:
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** 536.882   
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* Synonym(s):
 
* Synonym(s):
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** β-carotene
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** fermentation
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[RXN-13374]]
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'''9''' reactions found over '''16''' reactions in the full pathway
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* [[RXN-8025]]
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* [[ACETALD-DEHYDROG-RXN]]
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== Reaction(s) known to produce the compound ==
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** 2 associated gene(s):
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* [[RXN1F-151]]
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*** [[Tiso_gene_7649]]
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== Reaction(s) of unknown directionality ==
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*** [[Tiso_gene_2052]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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* [[ACONITATEDEHYDR-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13007]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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* [[ACONITATEHYDR-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13007]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[ALCOHOL-DEHYDROG-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_18459]]
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*** [[Tiso_gene_7649]]
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*** [[Tiso_gene_6563]]
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*** [[Tiso_gene_5424]]
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*** [[Tiso_gene_5425]]
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*** [[Tiso_gene_6562]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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* [[CITSYN-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18030]]
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*** [[Tiso_gene_9601]]
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*** [[Tiso_gene_9603]]
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*** [[Tiso_gene_9602]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_3691]]
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*** [[Tiso_gene_6720]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ISOCITDEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18262]]
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*** [[Tiso_gene_10809]]
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** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
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*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PEPDEPHOS-RXN]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_18206]]
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*** [[Tiso_gene_14504]]
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*** [[Tiso_gene_974]]
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*** [[Tiso_gene_14505]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=FHLMULTI-RXN FHLMULTI-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVFORMLY-RXN PYRUVFORMLY-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 
== External links  ==
 
== External links  ==
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* CAS : 7235-40-7
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* ECOCYC:
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* LIPID_MAPS : LMPR01070001
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
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* PUBCHEM:
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{{#set: taxonomic range=TAX-4751}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5280489 5280489]
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{{#set: taxonomic range=TAX-2}}
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* HMDB : HMDB00561
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{{#set: common name=mixed acid fermentation}}
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* LIGAND-CPD:
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{{#set: common name=fermentation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02094 C02094]
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{{#set: reaction found=9}}
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* CHEMSPIDER:
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{{#set: total reaction=16}}
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** [http://www.chemspider.com/Chemical-Structure.4444129.html 4444129]
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{{#set: completion rate=56.0}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17579 17579]
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* METABOLIGHTS : MTBLC17579
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−
{{#set: smiles=CC(C=CC=C(C=CC1(C(C)(C)CCCC=1C))C)=CC=CC=C(C=CC=C(C=CC2(=C(CCCC(C)(C)2)C))C)C}}
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−
{{#set: inchi key=InChIKey=OENHQHLEOONYIE-JLTXGRSLSA-N}}
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−
{{#set: common name=all-trans-β-carotene}}
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{{#set: molecular weight=536.882    }}
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{{#set: common name=β-carotene}}
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{{#set: consumed by=RXN-13374|RXN-8025}}
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{{#set: produced by=RXN1F-151}}
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Latest revision as of 19:25, 21 March 2018

Pathway FERMENTATION-PWY

  • taxonomic range:
  • common name:
    • mixed acid fermentation
  • Synonym(s):
    • fermentation

Reaction(s) found

9 reactions found over 16 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=FERMENTATION-PWY&oldid=41504"