Difference between revisions of "RXN-11244"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-13 PWY4FS-13] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11244 RXN-11244] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-13 PWY4FS-13] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11244 RXN-11244] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** extended VTC2 cycle
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[RXN-1882]]
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** 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12199]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_6621]]
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** 1 4-coumaroyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[Tiso_gene_6885]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN4FS-13 RXN4FS-13]
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** Source: [[orthology-esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN4FS-14 RXN4FS-14]
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* Gene: [[Tiso_gene_16145]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14262]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-6435]], 4-hydroxybenzoate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7046]], 4-coumarate degradation (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7046 PWY-7046]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=extended VTC2 cycle}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: reaction found=1}}
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{{#set: gene associated=Tiso_gene_6885|Tiso_gene_16145|Tiso_gene_14262}}
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{{#set: total reaction=3}}
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{{#set: in pathway=PWY-6435|PWY-7046}}
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{{#set: completion rate=33.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:25, 21 March 2018

Reaction RXN-11244

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-coumaroyl-CoA[c] + 1 H2O[c] => 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6435, 4-hydroxybenzoate biosynthesis V: PWY-6435
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7046, 4-coumarate degradation (anaerobic): PWY-7046
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11244&oldid=41534"