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− | [[Category:Reaction]] | + | [[Category:Gene]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] == | + | == Gene Tiso_gene_4648 == |
− | * direction:
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− | ** LEFT-TO-RIGHT
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− | * common name:
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− | ** probable_phosphoribosyl-amp_cyclohydrolase
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− | ** phosphoribosyl-amp_cyclohydrolase
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− | * ec number:
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− | ** [http://enzyme.expasy.org/EC/3.5.4.19 EC-3.5.4.19]
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| * Synonym(s): | | * Synonym(s): |
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− | == Reaction Formula == | + | == Reactions associated == |
− | * With identifiers:
| + | * Reaction: [[PANTEPADENYLYLTRAN-RXN]] |
− | ** 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
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− | * With common name(s):
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− | ** 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 1 H2O[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
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− | | + | |
− | == Genes associated with this reaction ==
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− | Genes have been associated with this reaction based on different elements listed below.
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− | * [[Tiso_gene_5047]] | + | |
− | ** IN-SILICO_ANNOTATION
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− | ***AUTOMATED-NAME-MATCH
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− | * [[Tiso_gene_11297]]
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− | ** IN-SILICO_ANNOTATION
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− | ***AUTOMATED-NAME-MATCH
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− | ** [[pantograph]]-[[athaliana]]
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− | ** [[pantograph]]-[[synechocystis]]
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− | ** [[pantograph]]-[[esiliculosus]]
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− | ** [[pantograph]]-[[creinhardtii]]
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− | == Pathways ==
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− | * [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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− | ** '''10''' reactions found over '''10''' reactions in the full pathway
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− | == Reconstruction information ==
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− | * Category: [[orthology]]
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− | ** Source: [[orthology-athaliana]]
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− | *** Tool: [[pantograph]]
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| ** Source: [[orthology-creinhardtii]] | | ** Source: [[orthology-creinhardtii]] |
− | *** Tool: [[pantograph]]
| + | == Pathways associated == |
− | ** Source: [[orthology-synechocystis]] | + | * [[COA-PWY-1]] |
− | *** Tool: [[pantograph]]
| + | * [[COA-PWY]] |
− | ** Source: [[orthology-esiliculosus]]
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− | *** Tool: [[pantograph]] | + | |
− | * Category: [[manual]]
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− | ** Source: [[manual-primary_network]]
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− | * Category: [[annotation]]
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− | ** Source: [[annotation-in-silico_annotation]]
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− | *** Tool: [[pathwaytools]]
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| == External links == | | == External links == |
− | * RHEA:
| + | {{#set: reaction associated=PANTEPADENYLYLTRAN-RXN}} |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
| + | {{#set: pathway associated=COA-PWY-1|COA-PWY}} |
− | * LIGAND-RXN:
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− | ** [http://www.genome.jp/dbget-bin/www_bget?R04037 R04037]
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− | * UNIPROT:
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− | ** [http://www.uniprot.org/uniprot/P44434 P44434]
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− | ** [http://www.uniprot.org/uniprot/Q9JVH6 Q9JVH6]
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− | ** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
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− | ** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
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− | ** [http://www.uniprot.org/uniprot/Q02130 Q02130]
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− | ** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
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− | ** [http://www.uniprot.org/uniprot/Q58825 Q58825]
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− | ** [http://www.uniprot.org/uniprot/O28329 O28329]
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− | ** [http://www.uniprot.org/uniprot/O34912 O34912]
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− | ** [http://www.uniprot.org/uniprot/P0A5B3 P0A5B3]
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− | ** [http://www.uniprot.org/uniprot/Q9HUB7 Q9HUB7]
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− | ** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
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− | ** [http://www.uniprot.org/uniprot/Q9K0H5 Q9K0H5]
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− | ** [http://www.uniprot.org/uniprot/O67780 O67780]
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− | ** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
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− | ** [http://www.uniprot.org/uniprot/Q50837 Q50837]
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− | ** [http://www.uniprot.org/uniprot/Q53158 Q53158]
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− | ** [http://www.uniprot.org/uniprot/P45353 P45353]
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− | ** [http://www.uniprot.org/uniprot/Q12670 Q12670]
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− | ** [http://www.uniprot.org/uniprot/P00815 P00815]
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− | ** [http://www.uniprot.org/uniprot/P07685 P07685]
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− | ** [http://www.uniprot.org/uniprot/O59667 O59667]
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− | ** [http://www.uniprot.org/uniprot/Q9X7C3 Q9X7C3]
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− | ** [http://www.uniprot.org/uniprot/O82768 O82768]
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− | ** [http://www.uniprot.org/uniprot/P10367 P10367]
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− | ** [http://www.uniprot.org/uniprot/P06989 P06989]
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− | {{#set: direction=LEFT-TO-RIGHT}} | + | |
− | {{#set: common name=probable_phosphoribosyl-amp_cyclohydrolase}} | + | |
− | {{#set: common name=phosphoribosyl-amp_cyclohydrolase}}
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− | {{#set: ec number=EC-3.5.4.19}}
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− | {{#set: gene associated=Tiso_gene_5047|Tiso_gene_11297}}
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− | {{#set: in pathway=HISTSYN-PWY}}
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− | {{#set: reconstruction category=orthology|manual|annotation}}
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− | {{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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− | {{#set: reconstruction tool=pantograph|pathwaytools}}
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