Difference between revisions of "PWY-6871"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY] == * taxonomic range:...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4891 TAX-48...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4891 TAX-4891]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** 4-hydroxyphenylacetate degradation
+
** 3-methylbutanol biosynthesis (engineered)
 
* Synonym(s):
 
* Synonym(s):
−
** 4-HPA degradation
 
−
** homoprotocatechuate degradation
 
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''2''' reactions found over '''8''' reactions in the full pathway
+
  '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN]]
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* [[2-ISOPROPYLMALATESYN-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_13940]]
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*** [[Tiso_gene_11453]]
−
** 2 reconstruction source(s) associated:
+
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[3-ISOPROPYLMALDEHYDROG-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_2920]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-synechocystis]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[SUCCSEMIALDDEHYDROG-RXN]]
+
* [[3-ISOPROPYLMALISOM-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_6952]]
+
*** [[Tiso_gene_12778]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-7693]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_6562]]
 +
*** [[Tiso_gene_7649]]
 +
*** [[Tiso_gene_5424]]
 +
*** [[Tiso_gene_5425]]
 +
*** [[Tiso_gene_6563]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
−
*** [[orthology-synechocystis]]
+
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-7800]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-8991]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_12778]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.15-RXN 1.13.11.15-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7692 RXN-7692]
−
* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.68-RXN 4.1.1.68-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=5.3.3.10-RXN 5.3.3.10-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=CHMS-DEHYDROGENASE-RXN CHMS-DEHYDROGENASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYHEPTA-DIENEDIOATE-HYDROXY-RXN HYDROXYHEPTA-DIENEDIOATE-HYDROXY-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8505 RXN-8505]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1224}}
+
{{#set: taxonomic range=TAX-4891}}
−
{{#set: common name=4-hydroxyphenylacetate degradation}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=4-HPA degradation|homoprotocatechuate degradation}}
+
{{#set: common name=3-methylbutanol biosynthesis (engineered)}}
−
{{#set: reaction found=2}}
+
{{#set: reaction found=6}}
−
{{#set: total reaction=8}}
+
{{#set: total reaction=7}}
−
{{#set: completion rate=25.0}}
+
{{#set: completion rate=86.0}}

Latest revision as of 20:26, 21 March 2018

Pathway PWY-6871

  • taxonomic range:
  • common name:
    • 3-methylbutanol biosynthesis (engineered)
  • Synonym(s):

Reaction(s) found

6 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6871&oldid=41581"