Difference between revisions of "RXN-9666"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-VALINESYN-PWY ALANINE-VALINESYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IM...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9666 RXN-9666] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-VALINESYN-PWY ALANINE-VALINESYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9666 RXN-9666] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** L-alanine biosynthesis I
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** [http://enzyme.expasy.org/EC/3.1.2.2 EC-3.1.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[ALARACECAT-RXN]]
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** 1 [[OLEOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[OLEATE-CPD]][c] '''+''' 1 [[CO-A]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_20278]]
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** 1 oleoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 oleate[c] '''+''' 1 coenzyme A[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 associated gene(s):
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* Gene: [[Tiso_gene_7477]]
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*** [[Tiso_gene_18403]]
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_14984]]
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== Pathways  ==
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** 5 reconstruction source(s) associated:
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* [[PWY-321]], cutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321]
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*** [[annotation-in-silico_annotation]]
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** '''3''' reactions found over '''16''' reactions in the full pathway
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*** [[manual-primary_network]]
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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*** [[annotation-experimental_annotation]]
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** '''8''' reactions found over '''18''' reactions in the full pathway
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*** [[orthology-synechocystis]]
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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*** [[orthology-esiliculosus]]
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** '''9''' reactions found over '''19''' reactions in the full pathway
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== Reaction(s) not found ==
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* [[PWY-5996]], oleate biosynthesis II (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5996 PWY-5996]
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* [http://metacyc.org/META/NEW-IMAGE?object=VALINE-PYRUVATE-AMINOTRANSFER-RXN VALINE-PYRUVATE-AMINOTRANSFER-RXN]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=ALANINE-VALINESYN-PWY ALANINE-VALINESYN-PWY]
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** [http://www.genome.jp/dbget-bin/www_bget?R08176 R08176]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=L-alanine biosynthesis I}}
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{{#set: ec number=EC-3.1.2.2}}
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{{#set: reaction found=2}}
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{{#set: gene associated=Tiso_gene_7477}}
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{{#set: total reaction=3}}
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{{#set: in pathway=PWY-321|PWY-6733|PWY-1121|PWY-5996}}
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{{#set: completion rate=67.0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:27, 21 March 2018

Reaction RXN-9666

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oleoyl-CoA[c] + 1 H2O[c] => 1 H+[c] + 1 oleate[c] + 1 coenzyme A[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-321, cutin biosynthesis: PWY-321
    • 3 reactions found over 16 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-5996, oleate biosynthesis II (animals and fungi): PWY-5996
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9666&oldid=41655"