Difference between revisions of "Tiso gene 3724"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Gene == Gene Tiso_gene_3724 == * right end position: ** 2455 * transcription direction: ** POSITIVE * left end position: ** 195 * centisome position: ** 1.0287523...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184] ==
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== Gene Tiso_gene_3724 ==
* taxonomic range:
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* right end position:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** 2455
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* transcription direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** POSITIVE
* common name:
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* left end position:
** pyrimidine deoxyribonucleotides de novo biosynthesis I
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** 195
 +
* centisome position:
 +
** 1.0287523   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reactions associated ==
'''9''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[MERCURY-II-REDUCTASE-RXN]]
* [[CDPREDUCT-RXN]]
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** Source: [[annotation-in-silico_annotation]]
** 4 associated gene(s):
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*** Assignment: automated-name-match
*** [[Tiso_gene_10617]]
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== Pathways associated ==
*** [[Tiso_gene_9916]]
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* [[P641-PWY]]
*** [[Tiso_gene_9915]]
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*** [[Tiso_gene_10138]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[DCDPKIN-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_9290]]
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*** [[Tiso_gene_18224]]
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*** [[Tiso_gene_17272]]
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*** [[Tiso_gene_16529]]
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*** [[Tiso_gene_17271]]
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*** [[Tiso_gene_195]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[DTDPKIN-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_18224]]
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*** [[Tiso_gene_16529]]
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*** [[Tiso_gene_195]]
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*** [[Tiso_gene_17271]]
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*** [[Tiso_gene_17272]]
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*** [[Tiso_gene_9290]]
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** 6 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
+
*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[DTMPKI-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_3755]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
+
* [[DUDPKIN-RXN]]
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** 6 associated gene(s):
+
*** [[Tiso_gene_17272]]
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*** [[Tiso_gene_17271]]
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*** [[Tiso_gene_9290]]
+
*** [[Tiso_gene_16529]]
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*** [[Tiso_gene_18224]]
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*** [[Tiso_gene_195]]
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** 6 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
+
*** [[orthology-synechocystis]]
+
*** [[manual-primary_network]]
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* [[DUTP-PYROP-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18793]]
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*** [[Tiso_gene_18792]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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* [[RXN-12195]]
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** 101 associated gene(s):
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*** [[Tiso_gene_8860]]
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*** [[Tiso_gene_11098]]
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*** [[Tiso_gene_1960]]
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*** [[Tiso_gene_1611]]
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*** [[Tiso_gene_3653]]
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*** [[Tiso_gene_12899]]
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*** [[Tiso_gene_1444]]
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*** [[Tiso_gene_2924]]
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*** [[Tiso_gene_8949]]
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*** [[Tiso_gene_17616]]
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*** [[Tiso_gene_546]]
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*** [[Tiso_gene_14226]]
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*** [[Tiso_gene_4026]]
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*** [[Tiso_gene_14646]]
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*** [[Tiso_gene_2447]]
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*** [[Tiso_gene_674]]
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*** [[Tiso_gene_5166]]
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*** [[Tiso_gene_195]]
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*** [[Tiso_gene_8601]]
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*** [[Tiso_gene_4596]]
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*** [[Tiso_gene_13738]]
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*** [[Tiso_gene_5525]]
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*** [[Tiso_gene_538]]
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*** [[Tiso_gene_2449]]
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*** [[Tiso_gene_19098]]
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*** [[Tiso_gene_12148]]
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*** [[Tiso_gene_1291]]
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*** [[Tiso_gene_20327]]
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*** [[Tiso_gene_4436]]
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*** [[Tiso_gene_7387]]
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*** [[Tiso_gene_12149]]
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*** [[Tiso_gene_2451]]
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*** [[Tiso_gene_6614]]
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*** [[Tiso_gene_199]]
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*** [[Tiso_gene_9114]]
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*** [[Tiso_gene_2450]]
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*** [[Tiso_gene_14474]]
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*** [[Tiso_gene_8461]]
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*** [[Tiso_gene_4437]]
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*** [[Tiso_gene_8584]]
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*** [[Tiso_gene_4155]]
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*** [[Tiso_gene_8164]]
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*** [[Tiso_gene_572]]
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*** [[Tiso_gene_9243]]
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*** [[Tiso_gene_4330]]
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*** [[Tiso_gene_9959]]
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*** [[Tiso_gene_2897]]
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*** [[Tiso_gene_623]]
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*** [[Tiso_gene_9926]]
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*** [[Tiso_gene_19350]]
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*** [[Tiso_gene_6181]]
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*** [[Tiso_gene_2631]]
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*** [[Tiso_gene_2929]]
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*** [[Tiso_gene_9423]]
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*** [[Tiso_gene_16478]]
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*** [[Tiso_gene_6180]]
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*** [[Tiso_gene_1984]]
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*** [[Tiso_gene_873]]
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*** [[Tiso_gene_2452]]
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*** [[Tiso_gene_15465]]
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*** [[Tiso_gene_3287]]
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*** [[Tiso_gene_4092]]
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*** [[Tiso_gene_8763]]
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*** [[Tiso_gene_9004]]
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*** [[Tiso_gene_14816]]
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*** [[Tiso_gene_5529]]
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*** [[Tiso_gene_4192]]
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*** [[Tiso_gene_7745]]
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*** [[Tiso_gene_8859]]
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*** [[Tiso_gene_829]]
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*** [[Tiso_gene_4194]]
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*** [[Tiso_gene_15043]]
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*** [[Tiso_gene_14227]]
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*** [[Tiso_gene_250]]
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*** [[Tiso_gene_1541]]
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*** [[Tiso_gene_537]]
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*** [[Tiso_gene_9234]]
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*** [[Tiso_gene_7123]]
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*** [[Tiso_gene_10282]]
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*** [[Tiso_gene_4726]]
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*** [[Tiso_gene_20353]]
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*** [[Tiso_gene_2448]]
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*** [[Tiso_gene_38]]
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*** [[Tiso_gene_11012]]
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*** [[Tiso_gene_2176]]
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*** [[Tiso_gene_17751]]
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*** [[Tiso_gene_13325]]
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*** [[Tiso_gene_7734]]
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*** [[Tiso_gene_1959]]
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*** [[Tiso_gene_13268]]
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*** [[Tiso_gene_9659]]
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*** [[Tiso_gene_8950]]
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*** [[Tiso_gene_2068]]
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*** [[Tiso_gene_14239]]
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*** [[Tiso_gene_13264]]
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*** [[Tiso_gene_2889]]
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*** [[Tiso_gene_13681]]
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*** [[Tiso_gene_1610]]
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*** [[Tiso_gene_13653]]
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*** [[Tiso_gene_17449]]
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*** [[Tiso_gene_10221]]
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** 3 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-esiliculosus]]
+
* [[THYMIDYLATESYN-RXN]]
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** 2 associated gene(s):
+
*** [[Tiso_gene_18478]]
+
*** [[Tiso_gene_7708]]
+
** 2 reconstruction source(s) associated:
+
*** [[manual-primary_network]]
+
*** [[annotation-in-silico_annotation]]
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* [[UDPREDUCT-RXN]]
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** 4 associated gene(s):
+
*** [[Tiso_gene_9915]]
+
*** [[Tiso_gene_10617]]
+
*** [[Tiso_gene_10138]]
+
*** [[Tiso_gene_9916]]
+
** 6 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-athaliana]]
+
*** [[orthology-synechocystis]]
+
*** [[manual-primary_network]]
+
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
* ECOCYC:
+
{{#set: right end position=2455}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7184 PWY-7184]
+
{{#set: transcription direction=POSITIVE}}
{{#set: taxonomic range=TAX-2157}}
+
{{#set: left end position=195}}
{{#set: taxonomic range=TAX-2759}}
+
{{#set: centisome position=1.0287523    }}
{{#set: taxonomic range=TAX-2}}
+
{{#set: reaction associated=MERCURY-II-REDUCTASE-RXN}}
{{#set: common name=pyrimidine deoxyribonucleotides de novo biosynthesis I}}
+
{{#set: pathway associated=P641-PWY}}
{{#set: reaction found=9}}
+
{{#set: total reaction=9}}
+
{{#set: completion rate=100.0}}
+

Latest revision as of 20:27, 21 March 2018

Gene Tiso_gene_3724

  • right end position:
    • 2455
  • transcription direction:
    • POSITIVE
  • left end position:
    • 195
  • centisome position:
    • 1.0287523
  • Synonym(s):

Reactions associated

Pathways associated

External links