Difference between revisions of "RXN-7658"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCTP-PYROPHOSPHATASE-RXN DCTP-PYROPHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7658 RXN-7658] == * direction: ** REVERSIBLE * common name: ** geranylgeranyl_diphosphate_reduc...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCTP-PYROPHOSPHATASE-RXN DCTP-PYROPHOSPHATASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7658 RXN-7658] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** inosine_triphosphate
+
** geranylgeranyl_diphosphate_reductase
−
** xtp3a-related_ntp_pyrophosphatase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.6.1.9 EC-3.6.1.9]
+
−
** [http://enzyme.expasy.org/EC/3.6.1.12 EC-3.6.1.12]
+
−
** [http://enzyme.expasy.org/EC/3.6.1.65 EC-3.6.1.65]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[DCTP]][c] '''=>''' 1 [[DCMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[CPD-7002]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 dCTP[c] '''=>''' 1 dCMP[c] '''+''' 1 H+[c] '''+''' 1 diphosphate[c]
+
** 1 dihydrogeranylgeranyl diphosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 geranylgeranyl diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8618]]
+
* Gene: [[Tiso_gene_2613]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_18793]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: AUTOMATED-NAME-MATCH
−
***EC-NUMBER
+
−
* [[Tiso_gene_18792]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7206]], pyrimidine deoxyribonucleotides dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7206 PWY-7206]
+
* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22636 22636]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01668 R01668]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08754 R08754]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P39262 P39262]
+
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: gene associated=Tiso_gene_2613}}
−
{{#set: common name=inosine_triphosphate}}
+
{{#set: in pathway=PWY-5063}}
−
{{#set: common name=xtp3a-related_ntp_pyrophosphatase}}
+
−
{{#set: ec number=EC-3.6.1.9}}
+
−
{{#set: ec number=EC-3.6.1.12}}
+
−
{{#set: ec number=EC-3.6.1.65}}
+
−
{{#set: gene associated=Tiso_gene_8618|Tiso_gene_18793|Tiso_gene_18792}}
+
−
{{#set: in pathway=PWY-7206}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:27, 21 March 2018

Reaction RXN-7658

  • direction:
    • REVERSIBLE
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dihydrogeranylgeranyl diphosphate[c] + 1 NADP+[c] <=> 1 H+[c] + 1 NADPH[c] + 1 geranylgeranyl diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7658&oldid=41709"