Difference between revisions of "PWY-5437"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18200 RXN-18200] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydrogenas...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18200 RXN-18200] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** 3-isopropylmalate dehydrogenase
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** L-threonine degradation I
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
** 1 [[NAD]][c] '''+''' 1 [[CPDQT-40]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-19487]][c]
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* [[RXN-15121]]
* With common name(s):
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** 0 associated gene:
** 1 NAD+[c] '''+''' 1 3-(7'-methylthio)heptylmalate[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-isopropyl-10-(methylthio)-2-oxodecanoate[c]
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** 2 reconstruction source(s) associated:
 
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*** [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-15122]]
* [[Tiso_gene_2920]]
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** 3 associated gene(s):
** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_8525]]
***EC-NUMBER
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*** [[Tiso_gene_17207]]
== Pathways  ==
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*** [[Tiso_gene_12535]]
* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450]
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** 3 reconstruction source(s) associated:
** '''10''' reactions found over '''30''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
* Category: [[annotation]]
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*** [[orthology-esiliculosus]]
** Source: [[annotation-experimental_annotation]]
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* [[RXN-15123]]
*** Tool: [[pathwaytools]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=KETOBUTFORMLY-RXN KETOBUTFORMLY-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROPKIN-RXN PROPKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PTAALT-RXN PTAALT-RXN]
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
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* ECOCYC:
{{#set: common name=3-isopropylmalate dehydrogenase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5437 PWY-5437]
{{#set: gene associated=Tiso_gene_2920}}
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{{#set: taxonomic range=TAX-2}}
{{#set: in pathway=PWYQT-4450}}
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{{#set: common name=L-threonine degradation I}}
{{#set: reconstruction category=annotation}}
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{{#set: reaction found=3}}
{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: total reaction=6}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=50.0}}

Latest revision as of 20:27, 21 March 2018

Pathway PWY-5437

  • taxonomic range:
  • common name:
    • L-threonine degradation I
  • Synonym(s):

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links