Difference between revisions of "PWY-6343"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARYLSULFAT-RXN ARYLSULFAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** sulfatase * ec nu...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6343 PWY-6343] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARYLSULFAT-RXN ARYLSULFAT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6343 PWY-6343] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** sulfatase
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** ferulate degradation
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.6.1 EC-3.1.6.1]
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* Synonym(s):
 
* Synonym(s):
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** ferulic acid degradation
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** vanillin biosynthesis II
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''3''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[Aryl-Sulfate]][c] '''=>''' 1 [[Aryl-Alcohol]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c]
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* [[6.2.1.34-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H2O[c] '''+''' 1 a phenol sulfate[c] '''=>''' 1 a phenol[c] '''+''' 1 H+[c] '''+''' 1 sulfate[c]
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*** [[Tiso_gene_12275]]
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*** [[Tiso_gene_14183]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* [[Tiso_gene_15834]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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== Reaction(s) not found ==
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***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.2.41-RXN 4.1.2.41-RXN]
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* [[Tiso_gene_5811]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.101-RXN 4.2.1.101-RXN]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9519]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11338]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7286]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_15619]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15833]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01243 R01243]
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{{#set: common name=ferulate degradation}}
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* UNIPROT:
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{{#set: common name=ferulic acid degradation|vanillin biosynthesis II}}
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** [http://www.uniprot.org/uniprot/P50473 P50473]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P20713 P20713]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P14217 P14217]
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{{#set: completion rate=33.0}}
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** [http://www.uniprot.org/uniprot/P14000 P14000]
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** [http://www.uniprot.org/uniprot/P25549 P25549]
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** [http://www.uniprot.org/uniprot/P28607 P28607]
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** [http://www.uniprot.org/uniprot/Q10723 Q10723]
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** [http://www.uniprot.org/uniprot/P50474 P50474]
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** [http://www.uniprot.org/uniprot/Q9X759 Q9X759]
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** [http://www.uniprot.org/uniprot/O43113 O43113]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=sulfatase}}
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{{#set: ec number=EC-3.1.6.1}}
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{{#set: gene associated=Tiso_gene_15834|Tiso_gene_5811|Tiso_gene_9519|Tiso_gene_11338|Tiso_gene_7286|Tiso_gene_15619|Tiso_gene_15833}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:25, 21 March 2018

Pathway PWY-6343

  • taxonomic range:
  • common name:
    • ferulate degradation
  • Synonym(s):
    • ferulic acid degradation
    • vanillin biosynthesis II

Reaction(s) found

1 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6343&oldid=41529"