Difference between revisions of "KDPGALDOL-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7195 PWY-7195] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7195 PWY-7195] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDPGALDOL-RXN KDPGALDOL-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
* ec number:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** [http://enzyme.expasy.org/EC/4.1.2.55 EC-4.1.2.55]
−
* common name:
+
** [http://enzyme.expasy.org/EC/4.1.2.14 EC-4.1.2.14]
−
** pyrimidine ribonucleosides salvage III
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
  '''1''' reactions found over '''2''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN0-361]]
+
** 1 [[2-KETO-3-DEOXY-6-P-GLUCONATE]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[PYRUVATE]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_9396]]
+
** 1 2-dehydro-3-deoxy-D-gluconate 6-phosphate[c] '''=>''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 pyruvate[c]
−
** 1 reconstruction source(s) associated:
+
 
−
*** [[annotation-in-silico_annotation]]
+
== Genes associated with this reaction  ==
−
== Reaction(s) not found ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [http://metacyc.org/META/NEW-IMAGE?object=CYTDEAM-RXN CYTDEAM-RXN]
+
* Gene: [[Tiso_gene_12620]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7310]], D-glucosaminate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7310 PWY-7310]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6507]], 4-deoxy-L-threo-hex-4-enopyranuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6507 PWY-6507]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[GALACTUROCAT-PWY]], D-galacturonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[ENTNER-DOUDOROFF-PWY]], Entner-Doudoroff pathway I: [http://metacyc.org/META/NEW-IMAGE?object=ENTNER-DOUDOROFF-PWY ENTNER-DOUDOROFF-PWY]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7562]], 3,6-anhydro-α-L-galactopyranose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7562 PWY-7562]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* RHEA:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7195 PWY-7195]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17089 17089]
−
{{#set: taxonomic range=TAX-2157}}
+
* LIGAND-RXN:
−
{{#set: taxonomic range=TAX-4751}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05605 R05605]
−
{{#set: taxonomic range=TAX-2}}
+
* UNIPROT:
−
{{#set: common name=pyrimidine ribonucleosides salvage III}}
+
** [http://www.uniprot.org/uniprot/P44480 P44480]
−
{{#set: reaction found=1}}
+
** [http://www.uniprot.org/uniprot/P0A955 P0A955]
−
{{#set: total reaction=2}}
+
** [http://www.uniprot.org/uniprot/P00885 P00885]
−
{{#set: completion rate=50.0}}
+
** [http://www.uniprot.org/uniprot/Q9JR44 Q9JR44]
 +
** [http://www.uniprot.org/uniprot/O25729 O25729]
 +
** [http://www.uniprot.org/uniprot/Q9ZKB4 Q9ZKB4]
 +
** [http://www.uniprot.org/uniprot/O83578 O83578]
 +
** [http://www.uniprot.org/uniprot/Q9WXS1 Q9WXS1]
 +
** [http://www.uniprot.org/uniprot/P50846 P50846]
 +
** [http://www.uniprot.org/uniprot/P38448 P38448]
 +
** [http://www.uniprot.org/uniprot/Q55872 Q55872]
 +
** [http://www.uniprot.org/uniprot/P94802 P94802]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-4.1.2.55}}
 +
{{#set: ec number=EC-4.1.2.14}}
 +
{{#set: gene associated=Tiso_gene_12620}}
 +
{{#set: in pathway=PWY-2221|PWY-7310|PWY-6507|GALACTUROCAT-PWY|ENTNER-DOUDOROFF-PWY|PWY-7562|PWY-7242}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:28, 21 March 2018

Reaction KDPGALDOL-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-dehydro-3-deoxy-D-gluconate 6-phosphate[c] => 1 D-glyceraldehyde 3-phosphate[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2221, Entner-Doudoroff pathway III (semi-phosphorylative): PWY-2221
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-7310, D-glucosaminate degradation: PWY-7310
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6507, 4-deoxy-L-threo-hex-4-enopyranuronate degradation: PWY-6507
    • 1 reactions found over 5 reactions in the full pathway
  • GALACTUROCAT-PWY, D-galacturonate degradation I: GALACTUROCAT-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • ENTNER-DOUDOROFF-PWY, Entner-Doudoroff pathway I: ENTNER-DOUDOROFF-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7562, 3,6-anhydro-α-L-galactopyranose degradation: PWY-7562
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7242, D-fructuronate degradation: PWY-7242
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=KDPGALDOL-RXN&oldid=41776"