Difference between revisions of "Tiso gene 12275"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] == * direction: ** LEFT-TO-RIGHT * common name: ** ribosomal_rna_small_subunit...")
(Created page with "Category:Gene == Gene Tiso_gene_12275 == * Synonym(s): == Reactions associated == * Reaction: 4-COUMARATE--COA-LIGASE-RXN ** Source: orthology-athaliana ** Source...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] ==
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== Gene Tiso_gene_12275 ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** ribosomal_rna_small_subunit_methyltransferase_h
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.199 EC-2.1.1.199]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4-COUMARATE--COA-LIGASE-RXN]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[16S-rRNA-cytidine1402]][c] '''=>''' 1 [[16S-rRNA-N4-methylcytidine1402]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[orthology-athaliana]]
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* With common name(s):
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** Source: [[orthology-esiliculosus]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytidine1402 in 16S rRNA[c] '''=>''' 1 an N4-methylcytidine1402  in 16S rRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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* Reaction: [[6.2.1.34-RXN]]
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** Source: [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[FACOAL18111Z]]
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* [[Tiso_gene_17723]]
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** Source: [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[LNLCCOAL]]
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
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* Reaction: [[LNLNCACOAL]]
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* Reaction: [[RXN-10695]]
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== Reconstruction information  ==
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** Source: [[orthology-esiliculosus]]
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* Category: [[annotation]]
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* Reaction: [[RXN-10919]]
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pathwaytools]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* Reaction: [[RXN-1126]]
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*** Tool: [[pathwaytools]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-16380]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-2001]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-9623]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[PWY-6920]]
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* [[PWY-6435]]
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* [[PWY-7398]]
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* [[PWY-7046]]
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* [[PWY-361]]
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* [[PWY-7397]]
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* [[PWY-1121]]
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* [[PWY-5989]]
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* [[PWY-5972]]
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* [[PWY-6673]]
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* [[PWY-6320]]
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* [[PWY-6343]]
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* [[PWY-6457]]
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* [[PWY-735]]
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* [[PWY1F-FLAVSYN]]
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* [[PWY-5754]]
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* [[PWY-5135]]
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* [[PWY-6982]]
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* [[PWY-5971]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=4-COUMARATE--COA-LIGASE-RXN|6.2.1.34-RXN|FACOAL18111Z|LNLCCOAL|LNLNCACOAL|RXN-10695|RXN-10919|RXN-1126|RXN-16380|RXN-2001|RXN-9623}}
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{{#set: common name=ribosomal_rna_small_subunit_methyltransferase_h}}
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{{#set: pathway associated=PWY-6920|PWY-6435|PWY-7398|PWY-7046|PWY-361|PWY-7397|PWY-1121|PWY-5989|PWY-5972|PWY-6673|PWY-6320|PWY-6343|PWY-6457|PWY-735|PWY1F-FLAVSYN|PWY-5754|PWY-5135|PWY-6982|PWY-5971}}
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{{#set: ec number=EC-2.1.1.199}}
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{{#set: gene associated=Tiso_gene_17723}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:28, 21 March 2018

Gene Tiso_gene_12275

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12275&oldid=41813"