Difference between revisions of "RXN-11638"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMEPIM-RXN DIAMINOPIMEPIM-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] == * direction: ** LEFT-TO-RIGHT * common name: ** ribosomal_rna_small_subunit...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMEPIM-RXN DIAMINOPIMEPIM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11638 RXN-11638] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** ribosomal_rna_small_subunit_methyltransferase_h
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.1.1.7 EC-5.1.1.7]
+
** [http://enzyme.expasy.org/EC/2.1.1.199 EC-2.1.1.199]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[LL-DIAMINOPIMELATE]][c] '''<=>''' 1 [[MESO-DIAMINOPIMELATE]][c]
+
** 1 [[16S-rRNA-cytidine1402]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[16S-rRNA-N4-methylcytidine1402]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L,L-diaminopimelate[c] '''<=>''' 1 meso-diaminopimelate[c]
+
** 1 a cytidine1402 in 16S rRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 an N4-methylcytidine1402  in 16S rRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_17723]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
+
* Category: [[annotation]]
−
** Source: [[manual-primary_network]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15393 15393]
+
{{#set: common name=ribosomal_rna_small_subunit_methyltransferase_h}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-2.1.1.199}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02735 R02735]
+
{{#set: gene associated=Tiso_gene_17723}}
−
* UNIPROT:
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/Q9PMD8 Q9PMD8]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q9JV69 Q9JV69]
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
** [http://www.uniprot.org/uniprot/P44859 P44859]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q58519 Q58519]
+
−
** [http://www.uniprot.org/uniprot/P0A6K1 P0A6K1]
+
−
** [http://www.uniprot.org/uniprot/Q51564 Q51564]
+
−
** [http://www.uniprot.org/uniprot/P46814 P46814]
+
−
** [http://www.uniprot.org/uniprot/O05322 O05322]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-5.1.1.7}}
+
−
{{#set: in pathway=PWY-5097|DAPLYSINESYN-PWY|PWY-2941}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=manual-primary_network}}
+

Latest revision as of 20:28, 21 March 2018

Reaction RXN-11638

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribosomal_rna_small_subunit_methyltransferase_h
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11638&oldid=41833"