Difference between revisions of "Tiso gene 10919"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-YEAST-RXN CERAMIDASE-YEAST-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://en...")
(Created page with "Category:Gene == Gene Tiso_gene_10919 == * right end position: ** 7974 * transcription direction: ** POSITIVE * left end position: ** 2478 * centisome position: ** 30.2305...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-YEAST-RXN CERAMIDASE-YEAST-RXN] ==
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== Gene Tiso_gene_10919 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 7974
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
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** POSITIVE
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* left end position:
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** 2478
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* centisome position:
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** 30.230574   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ANXANor]]
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** 1 [[WATER]][c] '''+''' 1 [[Alpha-hydroxyphytoceramides]][c] '''<=>''' 1 [[PHYTOSPINGOSINE]][c] '''+''' 1 [[2-Hydroxy-Fatty-Acids]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[RXN-13193]]
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** 1 H2O[c] '''+''' 1 a (2'R)-2'-hydroxy-phytoceramide[c] '''<=>''' 1 phytosphingosine[c] '''+''' 1 a (2R)-2-hydroxy fatty acid[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-7978]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: automated-name-match
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* [[Tiso_gene_14341]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN-7979]]
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== Pathways  ==
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* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
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** '''5''' reactions found over '''11''' reactions in the full pathway
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* [[PWY66-388]], fatty acid &alpha;-oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-388 PWY66-388]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-5945]]
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* [[PWY-5174]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: right end position=7974}}
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{{#set: ec number=EC-3.5.1.23}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_14341}}
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{{#set: left end position=2478}}
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{{#set: in pathway=PWY-7119|PWY66-388}}
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{{#set: centisome position=30.230574    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=ANXANor|RXN-13193|RXN-7978|RXN-7979}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: pathway associated=PWY-5945|PWY-5174}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:28, 21 March 2018

Gene Tiso_gene_10919

  • right end position:
    • 7974
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2478
  • centisome position:
    • 30.230574
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10919&oldid=41848"