Difference between revisions of "ExchangeSeed CPD-3"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** trna_intron_ca...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_CPD-3 ExchangeSeed_CPD-3] == * direction: ** REVERSIBLE * Synonym(s): == Reaction For...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_CPD-3 ExchangeSeed_CPD-3] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
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** REVERSIBLE
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* common name:
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−
** ORF
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−
** trna_intron_catalytic_cterminal_subfamily_protein
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−
* ec number:
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−
** [http://enzyme.expasy.org/EC/4.6.1.16 EC-4.6.1.16]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD0-2350]][c] '''=>''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] '''+''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] '''+''' 1 [[tRNA-Introns]][c]
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** 1.0 [[CPD-3]][C-BOUNDARY] '''<=>''' 1.0 [[CPD-3]][e]
 
* With common name(s):
 
* With common name(s):
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** 1 a polycistronic tRNA precursor[c] '''=>''' 1 a 3'-half-tRNA molecule with a 5'-OH end[c] '''+''' 1 a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end[c] '''+''' 1 a tRNA intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus[c]
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** 1.0 molybdate[C-BOUNDARY] '''<=>''' 1.0 molybdate[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_3776]]
 
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** IN-SILICO_ANNOTATION
 
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***EC-NUMBER
 
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* [[Tiso_gene_10338]]
 
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** IN-SILICO_ANNOTATION
 
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***EC-NUMBER
 
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* [[Tiso_gene_5254]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6689]], tRNA splicing I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7803]], tRNA splicing II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7803 PWY-7803]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
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* Category: [[manual]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[manual-import_from_medium]]
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*** Tool: [[pathwaytools]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: direction=REVERSIBLE}}
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** [http://www.uniprot.org/uniprot/O07118 O07118]
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{{#set: in pathway=}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reconstruction category=manual}}
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{{#set: common name=ORF}}
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{{#set: reconstruction source=manual-import_from_medium}}
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{{#set: common name=trna_intron_catalytic_cterminal_subfamily_protein}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: ec number=EC-4.6.1.16}}
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−
{{#set: gene associated=Tiso_gene_3776|Tiso_gene_10338|Tiso_gene_5254}}
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−
{{#set: in pathway=PWY-6689|PWY-7803}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction source=annotation-in-silico_annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:29, 21 March 2018

Reaction ExchangeSeed_CPD-3

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 molybdate[C-BOUNDARY] <=> 1.0 molybdate[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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