Difference between revisions of "RXN-5061"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DEG-PWY CYSTEINE-DEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] == * direction: ** LEFT-TO-RIGHT * common name: ** methylenetetrahydrofolate_red...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DEG-PWY CYSTEINE-DEG-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-cysteine degradation I
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** methylenetetrahydrofolate_reductase (ferredoxin)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.5.7.1 EC-1.5.7.1]
 
* Synonym(s):
 
* Synonym(s):
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** cysteine degradation I
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[3-SULFINOALANINE-AMINOTRANSFERASE-RXN]]
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** 2 [[PROTON]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[5-METHYL-THF-GLU-N]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_17718]]
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** 2 H+[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 an N5-methyl-tetrahydrofolate[c]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CYSTEINE-DIOXYGENASE-RXN]]
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* Gene: [[Tiso_gene_4806]]
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** 1 associated gene(s):
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_1457]]
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*** Assignment: EC-NUMBER
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** 3 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
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*** [[orthology-creinhardtii]]
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** '''7''' reactions found over '''12''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
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== Reaction(s) not found ==
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=3-SULFINYL-PYRUVATE-SPON-RXN 3-SULFINYL-PYRUVATE-SPON-RXN]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-40674}}
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* LIGAND-RXN:
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{{#set: common name=L-cysteine degradation I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01217 R01217]
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{{#set: common name=cysteine degradation I}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=2}}
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{{#set: common name=methylenetetrahydrofolate_reductase (ferredoxin)}}
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{{#set: total reaction=3}}
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{{#set: ec number=EC-1.5.7.1}}
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{{#set: completion rate=67.0}}
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{{#set: gene associated=Tiso_gene_4806}}
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{{#set: in pathway=PWY-2201|CODH-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:30, 21 March 2018

Reaction RXN-5061

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methylenetetrahydrofolate_reductase (ferredoxin)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2201, folate transformations I: PWY-2201
    • 7 reactions found over 12 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-5061&oldid=42015"