Difference between revisions of "RXN-11059"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11059 RXN-11059] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11059 RXN-11059] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.8.2.1 EC-2.8.2.1]
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** stearate biosynthesis II (bacteria and plants)
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* Synonym(s):
 
* Synonym(s):
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** stearic acid biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[RXN-16380]]
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** 1 [[PAPS]][c] '''+''' 1 [[N-ACETYL-SEROTONIN]][c] '''=>''' 1 [[CPD-12017]][c] '''+''' 1 [[3-5-ADP]][c] '''+''' 1 [[PROTON]][c]
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** 10 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_10876]]
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** 1 3'-phosphoadenylyl-sulfate[c] '''+''' 1 N-acetyl-serotonin[c] '''=>''' 1 N-acetyl-serotonin sulfate[c] '''+''' 1 adenosine 3',5'-bisphosphate[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_9394]]
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*** [[Tiso_gene_7855]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_136]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_500]]
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* Gene: [[Tiso_gene_5505]]
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*** [[Tiso_gene_13394]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_348]]
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== Pathways  ==
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*** [[Tiso_gene_12275]]
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* [[PWY-6398]], melatonin degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6398 PWY-6398]
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*** [[Tiso_gene_4191]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[Tiso_gene_135]]
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== Reconstruction information  ==
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** 3 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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*** Tool: [[pantograph]]
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*** [[orthology-creinhardtii]]
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* [[RXN-9632]]
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** 4 associated gene(s):
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*** [[Tiso_gene_15991]]
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*** [[Tiso_gene_5939]]
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*** [[Tiso_gene_14485]]
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*** [[Tiso_gene_19302]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-9633]]
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** 7 associated gene(s):
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*** [[Tiso_gene_13083]]
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*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_9885]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_13394]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-9634]]
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** 6 associated gene(s):
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_6884]]
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*** [[Tiso_gene_10876]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-9635]]
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** 1 associated gene(s):
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*** [[Tiso_gene_10778]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9548 RXN-9548]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-2.8.2.1}}
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{{#set: common name=stearate biosynthesis II (bacteria and plants)}}
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{{#set: gene associated=Tiso_gene_5505}}
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{{#set: common name=stearic acid biosynthesis}}
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{{#set: in pathway=PWY-6398}}
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{{#set: reaction found=5}}
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{{#set: reconstruction category=orthology}}
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{{#set: total reaction=6}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: completion rate=83.0}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:32, 21 March 2018

Reaction RXN-11059

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3'-phosphoadenylyl-sulfate[c] + 1 N-acetyl-serotonin[c] => 1 N-acetyl-serotonin sulfate[c] + 1 adenosine 3',5'-bisphosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6398, melatonin degradation I: PWY-6398
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11059&oldid=42194"