Difference between revisions of "PWY-7726"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN] == * direction: ** REV...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** acyl-coenzyme_a_oxidase
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** (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase)
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** acyl-_dehydrogenase
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** ORF
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** acyl-CoA_dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.8.8 EC-1.3.8.8]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''13''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[Long-Chain-234-Saturated-acyl-CoAs]][c] '''<=>''' 1 [[Long-Chain-Trans-23-Dehydroacyl-CoA]][c] '''+''' 1 [[ETF-Reduced]][c]
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* [[RXN-16112]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 a long-chain 2,3,4-saturated fatty acyl CoA[c] '''<=>''' 1 a long-chain trans-2,3-dehydroacyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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*** [[Tiso_gene_9871]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_5991]]
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* [[RXN-17109]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_9871]]
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* [[Tiso_gene_17967]]
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** 2 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_883]]
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* [[RXN-17113]]
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** EXPERIMENTAL_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_18566]]
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* [[Tiso_gene_16631]]
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** 1 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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* [[RXN-17115]]
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* [[Tiso_gene_18566]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 2 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_6475]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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* [[RXN-17116]]
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***EC-NUMBER
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** 5 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_3856]]
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== Reconstruction information  ==
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*** [[Tiso_gene_17451]]
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* Category: [[annotation]]
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*** [[Tiso_gene_15327]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_10116]]
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_3855]]
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** Source: [[annotation-experimental_annotation]]
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** 2 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16079 RXN-16079]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16081 RXN-16081]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16113 RXN-16113]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16114 RXN-16114]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17110 RXN-17110]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17111 RXN-17111]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17112 RXN-17112]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17114 RXN-17114]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00392 R00392]
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{{#set: common name=(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase)}}
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* UNIPROT:
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/P15650 P15650]
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{{#set: total reaction=13}}
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** [http://www.uniprot.org/uniprot/Q8IUN8 Q8IUN8]
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{{#set: completion rate=38.0}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: common name=ORF}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: ec number=EC-1.3.8.8}}
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{{#set: gene associated=Tiso_gene_5991|Tiso_gene_17967|Tiso_gene_883|Tiso_gene_16631|Tiso_gene_18566|Tiso_gene_6475}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:32, 21 March 2018

Pathway PWY-7726

  • taxonomic range:
  • common name:
    • (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase)
  • Synonym(s):

Reaction(s) found

5 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7726&oldid=42257"